RNA–Protein interactions for RNA: ENST00000497580.5

GAPVD1-220, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 2

Gene GAPVD1, Length 3,720 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-220ENST00000497580 PTRHD1Q6GMV3 140 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 CBLL1Q75N03 491 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 ZNF366Q8N895 744 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 AQP11Q8NBQ7 271 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 OR52E4Q8NGH9 312 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 OR52P1PQ8NH57 321 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 RBCK1Q9BYM8 510 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 TXNL4BQ9NX01 149 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 ZNF624Q9P2J8 865 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 ELF5Q9UKW6 265 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 TTC3P53804 2025 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 CRATP43155 626 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 CRYBB2P43320 205 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 VSX2P58304 361 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 CSTF1Q05048 431 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 EIF2B5Q13144 721 aaKnown RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 ZSWIM7Q19AV6 140 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 MIB1Q86YT6 1006 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 DENND6BQ8NEG7 585 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 OR11H4Q8NGC9 324 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 PGAP3Q96FM1 320 aaPredicted RBP12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 LINC00052Q96N35 136 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 NELL2Q99435 816 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 SLC28A3Q9HAS3 691 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 WASH6PQ9NQA3 447 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 NUDT4Q9NZJ9 180 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 POFUT2Q9Y2G5 429 aa12.56□□□□□ -0.4
GAPVD1-220ENST00000497580 NFKBIEO00221 500 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 MANBAO00462 879 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 SCG5P05408 212 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 WARSP23381 471 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 CRYZQ08257 329 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 GRK1Q15835 563 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 RASSF6Q6ZTQ3 369 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 LSM14AQ8ND56 463 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ARRDC2Q8TBH0 407 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 RBPMSQ93062 196 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 FAM105AQ9NUU6 356 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ZMAT5Q9UDW3 170 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 UBQLN2Q9UHD9 624 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 GSAPA4D1B5 854 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 SLC35F4A4IF30 521 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 AKAP8O43823 692 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 PPM1BO75688 479 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 IFNA7P01567 189 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 FGF1P05230 155 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ETV1P50549 477 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 KLHL22Q53GT1 634 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 CTSL3PQ5NE16 218 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ATAT1Q5SQI0 421 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 AFTPHQ6ULP2 937 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 FAM92BQ6ZTR7 304 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ZNF655Q8N720 491 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 SMARCD1Q96GM5 515 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 POLR1EQ9GZS1 481 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ELOVL2Q9NXB9 296 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 FZD4Q9ULV1 537 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 CFDP00746 253 aaPredicted RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 NNMTP40261 264 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 LRRC74AQ0VAA2 488 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 PTOV1Q86YD1 416 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 SYT12Q8IV01 421 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 CELF5Q8N6W0 485 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 MTMR14Q8NCE2 650 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 OR6J1Q8NGC5 347 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 BTN2A2Q8WVV5 523 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ASB12Q8WXK4 309 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 SLC9A6Q92581 669 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 SLC25A46Q96AG3 418 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ACPTQ9BZG2 426 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 ATP13A1Q9HD20 1204 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 TLR8Q9NR97 1041 aaKnown RBP12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 DERAQ9Y315 318 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 MCM3APO60318 1980 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 LRRC37AA6NMS7 1700 aa12.55□□□□□ -0.4
GAPVD1-220ENST00000497580 A0A0A6YYJ9 748 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 PRR23AA6NEV1 266 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 LGALS8O00214 317 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 KPNA5O15131 536 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 PDYNP01213 254 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 HOXD4P09016 255 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 HBQ1P09105 142 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 ANXA8P13928 327 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 PCBP1Q15365 356 aaKnown RBP eCLIP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 LIX1LQ8IVB5 337 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 CLDN19Q8N6F1 224 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 RPRD1AQ96P16 312 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 NUDT15Q9NV35 164 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 TMEM161AQ9NX61 479 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 CDKN2AIPQ9NXV6 580 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 PLEKHB1Q9UF11 243 aaPredicted RBP12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 PEX11BO96011 259 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 CLDN20P56880 219 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 CTAG1AP78358 180 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 ARRDC4Q8NCT1 418 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 SLAIN1Q8ND83 568 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 APIPQ96GX9 242 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 KCTD7Q96MP8 289 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 EPYCQ99645 322 aa12.54□□□□□ -0.4
GAPVD1-220ENST00000497580 CHIAQ9BZP6 476 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms