RNA–Protein interactions for RNA: ENST00000497022.1

VPS26A-208, Transcript of VPS26, retromer complex component A, humanhuman

TSL 3

Gene VPS26A, Length 458 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS26A-208ENST00000497022 OR3A3P47888 321 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 CYLC2Q14093 348 aaPredicted RBP2.39□□□□□ -2.03
VPS26A-208ENST00000497022 COG2Q14746 738 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 UGCGQ16739 394 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 NHLRC3Q5JS37 347 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 C6orf136Q5SQH8 315 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 LINC00242Q5T6M2 205 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 TCEAL6Q6IPX3 200 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 BTNL8Q6UX41 500 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 PPP1R21Q6ZMI0 780 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 Q71RC1 249 aaPredicted RBP2.39□□□□□ -2.03
VPS26A-208ENST00000497022 LRRC49Q8IUZ0 686 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 CROCCP3Q8IVE0 287 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 PARP8Q8N3A8 854 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 OR1B1Q8NGR6 318 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 KIAA1524Q8TCG1 905 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 CD99L2Q8TCZ2 262 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 MRPS27Q92552 414 aaKnown RBP2.39□□□□□ -2.03
VPS26A-208ENST00000497022 RAD54LQ92698 747 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 TNFRSF13CQ96RJ3 184 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 NAA11Q9BSU3 229 aaPredicted RBP2.39□□□□□ -2.03
VPS26A-208ENST00000497022 ANKRD2Q9GZV1 360 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 ST6GALNAC4Q9H4F1 302 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 C5orf66Q9H5L9 145 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 ANAPC11Q9NYG5 84 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 NYAP2Q9P242 653 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 DBF4Q9UBU7 674 aaPredicted RBP2.39□□□□□ -2.03
VPS26A-208ENST00000497022 ZNF346Q9UL40 294 aaKnown RBP2.39□□□□□ -2.03
VPS26A-208ENST00000497022 SPATA2Q9UM82 520 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 KLK4Q9Y5K2 254 aa2.39□□□□□ -2.03
VPS26A-208ENST00000497022 TRBV5-4A0A0C4DH59 114 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 A8MXE2 369 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 HAT1O14929 419 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 PGRMC2O15173 223 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 TBX10O75333 385 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 ANGPTL1O95841 491 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 C9P02748 559 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 HCKP08631 526 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 QDPRP09417 244 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 MATKP42679 507 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 RPL34P49207 117 aaKnown RBP2.38□□□□□ -2.03
VPS26A-208ENST00000497022 EVCP57679 992 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 TNK1Q13470 666 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 ZNF273Q14593 569 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 PPA1Q15181 289 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 HYAL4Q2M3T9 481 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 TCP11X2Q5H9J9 407 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 MUC21Q5SSG8 566 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 UTF1Q5T230 341 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 MFSD4BQ5TF39 518 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 C11orf57Q6ZUT1 292 aaPredicted RBP2.38□□□□□ -2.03
VPS26A-208ENST00000497022 CHST3Q7LGC8 479 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 ABI3BPQ7Z7G0 1075 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 BANPQ8N9N5 519 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 B3GALT6Q96L58 329 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 AK8Q96MA6 479 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 ZIM3Q96PE6 472 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 PINK1Q9BXM7 581 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 YTHDF1Q9BYJ9 559 aaKnown RBP2.38□□□□□ -2.03
VPS26A-208ENST00000497022 FAM129AQ9BZQ8 928 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 ANKEF1Q9NU02 776 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 MRGBPQ9NV56 204 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 UBQLN2Q9UHD9 624 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 SNX7Q9UNH6 387 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 NCKAP1Q9Y2A7 1128 aa2.38□□□□□ -2.03
VPS26A-208ENST00000497022 MRPL11Q9Y3B7 192 aaKnown RBP2.38□□□□□ -2.03
VPS26A-208ENST00000497022 CFAP65Q6ZU64 1925 aaKnown RBP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 IGLON5A6NGN9 336 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 CCDC188H7C350 402 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 P4HA2O15460 535 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 FLRT2O43155 660 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 LY6G6DO95868 133 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 MOCS2O96007 188 aaPredicted RBP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 EEF2P13639 858 aaKnown RBP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 EEF1DP29692 281 aaKnown RBP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 SPRP35270 261 aaPredicted RBP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 DRD3P35462 400 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 RAD52P43351 418 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 CAMK2DQ13557 499 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 MAPK11Q15759 364 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 ECSCRQ19T08 205 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 KRBOX4Q5JUW0 171 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 DDX59Q5T1V6 619 aaKnown RBP eCLIP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 KRT74Q7RTS7 529 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 NCOA7Q8NI08 942 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 RUNDC3BQ96NL0 473 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 PNNQ9H307 717 aaKnown RBP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 UBQLN3Q9H347 655 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 DPEP2Q9H4A9 486 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 PLEKHA3Q9HB20 300 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 GTF3C4Q9UKN8 822 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 NIP7Q9Y221 180 aaKnown RBP eCLIP2.37□□□□□ -2.03
VPS26A-208ENST00000497022 CCL27Q9Y4X3 112 aa2.37□□□□□ -2.03
VPS26A-208ENST00000497022 LOC390937A0A1W2PQ73 354 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 BCLAF3A2AJT9 711 aaKnown RBP2.36□□□□□ -2.03
VPS26A-208ENST00000497022 ZNF732B4DXR9 585 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 ANHXE9PGG2 379 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 FBP2O00757 339 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 CCDC175P0C221 793 aa2.36□□□□□ -2.03
VPS26A-208ENST00000497022 ZNF19P17023 458 aa2.36□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms