RNA–Protein interactions for RNA: ENST00000496723.1

CD46-218, Transcript of CD46 molecule, humanhuman

TSL 5

Gene CD46, Length 661 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-218ENST00000496723 SIX1Q15475 284 aaPredicted RBP2.97□□□□□ -1.93
CD46-218ENST00000496723 TCEAL6Q6IPX3 200 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 KCNMB4Q86W47 210 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 MEX3DQ86XN8 651 aaKnown RBP2.97□□□□□ -1.93
CD46-218ENST00000496723 CREBRFQ8IUR6 639 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 THNSL1Q8IYQ7 743 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 C11orf52Q96A22 123 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 OCR1Q9BZK8 76 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 FNDC4Q9H6D8 234 aaPredicted RBP2.97□□□□□ -1.93
CD46-218ENST00000496723 KCNK13Q9HB14 408 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 PDRG1Q9NUG6 133 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 PRR34Q9NV39 138 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 PCDHGA1Q9Y5H4 931 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 HCFC1P51610 2035 aa2.97□□□□□ -1.93
CD46-218ENST00000496723 ABCA7Q8IZY2 2146 aa2.96□□□□□ -1.93
CD46-218ENST00000496723 A8MU76 341 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 ZNF732B4DXR9 585 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 PHF1O43189 567 aaPredicted RBP2.96□□□□□ -1.94
CD46-218ENST00000496723 GPRIN2O60269 458 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 SELENOFO60613 162 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 ZFYP08048 801 aaPredicted RBP2.96□□□□□ -1.94
CD46-218ENST00000496723 TSPY3P0CV98 308 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 TSPY8P0CW00 308 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 CD1DP15813 335 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 OR3A1P47881 315 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 KHKP50053 298 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 TSPY1Q01534 308 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 CNTN1Q12860 1018 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 MAPK11Q15759 364 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 KNOP1Q1ED39 458 aaKnown RBP2.96□□□□□ -1.94
CD46-218ENST00000496723 EIPR1Q53HC9 387 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 ZRANB3Q5FWF4 1079 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 SEL1L3Q68CR1 1132 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 ZNF770Q6IQ21 691 aaPredicted RBP2.96□□□□□ -1.94
CD46-218ENST00000496723 CAVIN1Q6NZI2 390 aaKnown RBP2.96□□□□□ -1.94
CD46-218ENST00000496723 SLC27A4Q6P1M0 643 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 Q6ZR54 194 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 C17orf107Q6ZR85 190 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 CEACAM19Q7Z692 300 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 CARM1Q86X55 608 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 METTL23Q86XA0 190 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 FBXL16Q8N461 479 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 C4orf32Q8N8J7 132 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 TRAF3IP1Q8TDR0 691 aaPredicted RBP2.96□□□□□ -1.94
CD46-218ENST00000496723 TAAR6Q96RI8 345 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 MOB1AQ9H8S9 216 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 WDR41Q9HAD4 459 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 MRGBPQ9NV56 204 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 TSPAN16Q9UKR8 245 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 AUP1Q9Y679 476 aa2.96□□□□□ -1.94
CD46-218ENST00000496723 IGLV3-10A0A075B6K4 115 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 A0A0B4J203 849 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 TRAV34A0A0B4J273 112 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 TRGV8A0A0C4DH27 118 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 ACSL4O60488 711 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 HSP90AA1P07900 732 aaKnown RBP2.95□□□□□ -1.94
CD46-218ENST00000496723 MELTFP08582 738 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 LMO2P25791 158 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 SRD5A2P31213 254 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 FCGR2BP31994 310 aaPredicted RBP2.95□□□□□ -1.94
CD46-218ENST00000496723 FCGR2CP31995 323 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 SLC1A3P43003 542 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 PRELPP51888 382 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 RIDAP52758 137 aaKnown RBP2.95□□□□□ -1.94
CD46-218ENST00000496723 EVCP57679 992 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 ACY1Q03154 408 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 FOLH1Q04609 750 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 CETN1Q12798 172 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 TWISTNBQ3B726 338 aaPredicted RBP2.95□□□□□ -1.94
CD46-218ENST00000496723 ARMCX4Q5H9R4 360 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 MCM10Q7L590 875 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 ANKRD46Q86W74 232 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 MARCH9Q86YJ5 346 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 C4orf19Q8IY42 314 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 TDHQ8IZJ6 230 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 SUMF1Q8NBK3 374 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 ZPLD1Q8TCW7 415 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 CD99L2Q8TCZ2 262 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 SGF29Q96ES7 293 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 C1orf147Q96MC9 270 aaPredicted RBP2.95□□□□□ -1.94
CD46-218ENST00000496723 HNRNPABQ99729 332 aaKnown RBP2.95□□□□□ -1.94
CD46-218ENST00000496723 PRMT1Q99873 361 aaKnown RBP2.95□□□□□ -1.94
CD46-218ENST00000496723 LRRCC1Q9C099 1032 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 STRADBQ9C0K7 418 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 POMT1Q9Y6A1 747 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 ZNF318Q5VUA4 2279 aa2.95□□□□□ -1.94
CD46-218ENST00000496723 ADAMTS9Q9P2N4 1935 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 K7EQG2 157 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 SIX3O95343 332 aaPredicted RBP2.94□□□□□ -1.94
CD46-218ENST00000496723 ANGPTL1O95841 491 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 RLN1P04808 185 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 KRT3P12035 628 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 IFNAR1P17181 557 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 NPBWR1P48145 328 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 CRYBA2P53672 197 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 RPP38P78345 283 aaKnown RBP2.94□□□□□ -1.94
CD46-218ENST00000496723 C9orf66Q5T8R8 295 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 AGAP7PQ5VUJ5 663 aa2.94□□□□□ -1.94
CD46-218ENST00000496723 SHQ1Q6PI26 577 aaKnown RBP2.94□□□□□ -1.94
CD46-218ENST00000496723 REG3GQ6UW15 175 aa2.94□□□□□ -1.94
Retrieved 100 of 20,778 RNA–protein pairs in 55.1 ms