RNA–Protein interactions for RNA: ENST00000496385.5

HPS4-217, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 2

Gene HPS4, Length 2,772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-217ENST00000496385 MTERF3Q96E29 417 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 NPY6RQ99463 290 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MFSD1Q9H3U5 465 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SAV1Q9H4B6 383 aaPredicted RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 HHATLQ9HCP6 504 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 DCAF16Q9NXF7 216 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 THUMPD1Q9NXG2 353 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 COA4Q9NYJ1 87 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 SLC2A6Q9UGQ3 507 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 MAFFQ9ULX9 164 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 NDRG2Q9UN36 371 aaKnown RBP8.73□□□□□ -1.01
HPS4-217ENST00000496385 ABCG2Q9UNQ0 655 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 CLCA3PQ9Y6N3 262 aa8.73□□□□□ -1.01
HPS4-217ENST00000496385 GABRDO14764 452 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 GATCO43716 136 aaKnown RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 RNGTTO60942 597 aaKnown RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 S1PR4O95977 384 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 LCP1P13796 627 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 ANXA8P13928 327 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 WARSP23381 471 aaKnown RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 HK3P52790 923 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 ATP12AP54707 1039 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 CDKN2DP55273 166 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 PTCHD3Q3KNS1 767 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 GPR33Q49SQ1 333 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 NHLRC3Q5JS37 347 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 FAM209BQ5JX69 171 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 MEDAGQ5VYS4 303 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 USP45Q70EL2 814 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 MS4A15Q8N5U1 240 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 DCBLD1Q8N8Z6 715 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 UXS1Q8NBZ7 420 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 OR4D10Q8NGI6 311 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 PHF21AQ96BD5 680 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 PABPC5Q96DU9 382 aaKnown RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 PPP3R2Q96LZ3 170 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 ERMAPQ96PL5 475 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 OR2M2Q96R28 347 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 OR5M11Q96RB7 305 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 ZNF382Q96SR6 550 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 CPPED1Q9BRF8 314 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 SLC28A3Q9HAS3 691 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 SEMA4BQ9NPR2 832 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 GKN1Q9NS71 199 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 NDUFB11Q9NX14 153 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 MPP6Q9NZW5 540 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 PLEKHB1Q9UF11 243 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 POFUT2Q9Y2G5 429 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 A0A0B4J203 849 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 SLC22A23A1A5C7 686 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 GFRA2O00451 464 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 SIGLEC6O43699 453 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 NBNO60934 754 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 TIMP1P01033 207 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 IQCF3P0C7M6 154 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 G6PDP11413 515 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 ADRA1BP35368 520 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 INPP1P49441 399 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 MEOX2P50222 304 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 GPNMBQ14956 572 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 OR4D1Q15615 310 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 TAF12Q16514 161 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 TCTN1Q2MV58 587 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 LGALSLQ3ZCW2 172 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 ZNF789Q5FWF6 425 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 FIP1L1Q6UN15 594 aaKnown RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 RANBP10Q6VN20 620 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 MACC1Q6ZN28 852 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 RNF165Q6ZSG1 346 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 HSD17B13Q7Z5P4 300 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 TMCO2Q7Z6W1 182 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 SLC44A2Q8IWA5 706 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 TP53INP2Q8IXH6 220 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 MSRB3Q8IXL7 192 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 DEFB106AQ8N104 65 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 OR52K2Q8NGK3 314 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 SCMH1Q96GD3 660 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 FDXACB1Q9BRP7 624 aaPredicted RBP8.72□□□□□ -1.01
HPS4-217ENST00000496385 TMEM175Q9BSA9 504 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 FICDQ9BVA6 458 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 DERL2Q9GZP9 239 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 GLOD4Q9HC38 313 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 SLC25A37Q9NYZ2 338 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 UBP1Q9NZI7 540 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 NDRG3Q9UGV2 375 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 PFDN2Q9UHV9 154 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 TMCC3Q9ULS5 477 aa8.72□□□□□ -1.01
HPS4-217ENST00000496385 KIAA0355O15063 1070 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 CASC3O15234 703 aaKnown RBP8.71□□□□□ -1.01
HPS4-217ENST00000496385 PLOD3O60568 738 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 MMP20O60882 483 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 MPC2O95563 127 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 VIPP01282 170 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 ESR1P03372 595 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 FHP07954 510 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 NFICP08651 508 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 SELPP16109 830 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 CTPS1P17812 591 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 CRISP3P54108 245 aa8.71□□□□□ -1.01
HPS4-217ENST00000496385 MRPS6P82932 125 aaKnown RBP8.71□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms