RNA–Protein interactions for RNA: ENST00000495630.1

TMEM53-209, Transcript of transmembrane protein 53, humanhuman

TSL 2

Gene TMEM53, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-209ENST00000495630 HOXB4P17483 251 aaPredicted RBP16.35■□□□□ 0.21
TMEM53-209ENST00000495630 VPS41P49754 854 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 SSR4P51571 173 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 AP1S2P56377 157 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 GPR85P60893 370 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 RAB8AP61006 207 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 FOLH1Q04609 750 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 MYBPHQ13203 477 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 PHKG1Q16816 387 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 HSP90AA5PQ58FG0 334 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 CATSPEREQ5SY80 951 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 PAQR3Q6TCH7 311 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 TGIF2LYQ8IUE0 185 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 GPALPP1Q8IXQ4 340 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 OR5M3Q8NGP4 307 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 ATL1Q8WXF7 558 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 PYCR2Q96C36 320 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 FAM167BQ9BTA0 163 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 SLC6A16Q9GZN6 736 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 ARL15Q9NXU5 204 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 HCFC1P51610 2035 aa16.35■□□□□ 0.21
TMEM53-209ENST00000495630 PRRC2AP48634 2157 aaKnown RBP16.34■□□□□ 0.21
TMEM53-209ENST00000495630 OR14I1A6ND48 311 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 NPIPA2E9PIF3 369 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 NPIPA3F8WFD2 350 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 ZFAND5O76080 213 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 MYO1DO94832 1006 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 GPR143P51810 404 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 PPIAP62937 165 aaKnown RBP16.34■□□□□ 0.21
TMEM53-209ENST00000495630 KCTD19Q17RG1 926 aaPredicted RBP16.34■□□□□ 0.21
TMEM53-209ENST00000495630 CREB3L4Q8TEY5 395 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 VMP1Q96GC9 406 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 SERPINB12Q96P63 405 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 CCDC77Q9BR77 488 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 RHBGQ9H310 441 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 ZDHHC11Q9H8X9 412 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 KCMF1Q9P0J7 381 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 ERVK-11Q9UQG0 969 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 MAD1L1Q9Y6D9 718 aa16.34■□□□□ 0.21
TMEM53-209ENST00000495630 PABPN1LA6NDY0 278 aaKnown RBP16.33■□□□□ 0.2
TMEM53-209ENST00000495630 A8MVJ9 347 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 ACOT7O00154 380 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 BCKDKO14874 412 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 KRT14P02533 472 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 SERPINA6P08185 405 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 ACVR2AP27037 513 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 HNF4AP41235 474 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 MAGEA3P43357 314 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 IL2P60568 153 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 PLGLB1Q02325 96 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 HYAL2Q12891 473 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 BBS9Q3SYG4 887 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 SLC22A16Q86VW1 577 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 CA13Q8N1Q1 262 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 GPATCH11Q8N954 259 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 SERBP1Q8NC51 408 aaKnown RBP eCLIP16.33■□□□□ 0.2
TMEM53-209ENST00000495630 C2CD4AQ8NCU7 369 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-209ENST00000495630 PSD4Q8NDX1 1056 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 OR10Q1Q8NGQ4 319 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 GABPB2Q8TAK5 448 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-209ENST00000495630 SLC5A11Q8WWX8 675 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 NRGNQ92686 78 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 NEIL2Q969S2 332 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 FBXL8Q96CD0 374 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 LINGO1Q96FE5 620 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 SIGLEC10Q96LC7 697 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 NDNQ99608 321 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 TTYH2Q9BSA4 534 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 KLHL31Q9H511 634 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 IARS2Q9NSE4 1012 aaKnown RBP16.33■□□□□ 0.2
TMEM53-209ENST00000495630 DEPPQ9NTK1 212 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 HPF1Q9NWY4 346 aa16.33■□□□□ 0.2
TMEM53-209ENST00000495630 DNAJB12Q9NXW2 375 aaKnown RBP16.33■□□□□ 0.2
TMEM53-209ENST00000495630 ZNF223Q9UK11 482 aaPredicted RBP16.33■□□□□ 0.2
TMEM53-209ENST00000495630 GOLGA8MH3BSY2 632 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 CTAG2O75638 210 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 ZFP36L2P47974 494 aaKnown RBP16.32■□□□□ 0.2
TMEM53-209ENST00000495630 NR0B1P51843 470 aaKnown RBP16.32■□□□□ 0.2
TMEM53-209ENST00000495630 CDKN2DP55273 166 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 NDUFAF5Q5TEU4 345 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 HECTD2Q5U5R9 776 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 AGGF1Q8N302 714 aaeCLIP16.32■□□□□ 0.2
TMEM53-209ENST00000495630 ANKRD53Q8N9V6 530 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 OR2M7Q8NG81 312 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 NCLNQ969V3 563 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 PDLIM2Q96JY6 352 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 AIF1LQ9BQI0 150 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 SPNS1Q9H2V7 528 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 PELI2Q9HAT8 420 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 PNO1Q9NRX1 252 aaKnown RBP16.32■□□□□ 0.2
TMEM53-209ENST00000495630 PNPLA3Q9NST1 481 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 CCM2LQ9NUG4 571 aaPredicted RBP16.32■□□□□ 0.2
TMEM53-209ENST00000495630 EDARQ9UNE0 448 aa16.32■□□□□ 0.2
TMEM53-209ENST00000495630 A0A1B0GVC2 190 aa16.31■□□□□ 0.2
TMEM53-209ENST00000495630 PINLYPA6NC86 204 aa16.31■□□□□ 0.2
TMEM53-209ENST00000495630 FIGNL2A6NMB9 653 aa16.31■□□□□ 0.2
TMEM53-209ENST00000495630 CLDN4O14493 209 aa16.31■□□□□ 0.2
TMEM53-209ENST00000495630 FAM155BO75949 473 aa16.31■□□□□ 0.2
TMEM53-209ENST00000495630 IGHG3P01860 377 aa16.31■□□□□ 0.2
TMEM53-209ENST00000495630 GLI4P10075 376 aa16.31■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms