RNA–Protein interactions for RNA: ENST00000494728.5

VTI1A-208, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 463 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-208ENST00000494728 APCDD1LQ8NCL9 501 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 ANKRD7Q92527 254 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 MS4A6EQ96DS6 147 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 PTCHD1Q96NR3 888 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 CSF3RQ99062 836 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 RBBP8Q99708 897 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 DERL2Q9GZP9 239 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 CDCP1Q9H5V8 836 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 POPDC3Q9HBV1 291 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 SAYSD1Q9NPB0 183 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 COPG2Q9UBF2 871 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 TINAGQ9UJW2 476 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 KCNE2Q9Y6J6 123 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 HIVEP1P15822 2718 aa10.9□□□□□ -0.66
VTI1A-208ENST00000494728 A0A1B0GUH1 482 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 ARHGAP10A1A4S6 786 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 FAM159BA6NKW6 160 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 NDC80O14777 642 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 ERI3O43414 337 aaKnown RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 PRKNO60260 465 aaPredicted RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 SLC19A2O60779 497 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 FAM155BO75949 473 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 CRYABP02511 175 aaKnown RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 SERPINA6P08185 405 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 C1GALT1C1LP0DN25 315 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 RNH1P13489 461 aaKnown RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 CD1DP15813 335 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 IL10P22301 178 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 CERS1P27544 350 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 KCNC1P48547 511 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 HSPA7P48741 367 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 HNMTP50135 292 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 PER3P56645 1201 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 ADORA2A-AS1P86434 159 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 ACTN3Q08043 901 aaPredicted RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 DLG1Q12959 904 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 ZKSCAN8Q15776 578 aaPredicted RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 C3AR1Q16581 482 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 UBAP2Q5T6F2 1119 aaKnown RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 CMC1Q7Z7K0 106 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 TICAM1Q8IUC6 712 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 SCUBE1Q8IWY4 988 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 CPSF7Q8N684 471 aaKnown RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 SLC5A8Q8N695 610 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 FAM47BQ8NA70 645 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 TRPV3Q8NET8 790 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 DNAJB8Q8NHS0 232 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 SUN3Q8TAQ9 357 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 GAL3ST3Q96A11 431 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 QRFPRQ96P65 431 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 GPR22Q99680 433 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 UTP23Q9BRU9 249 aaKnown RBP10.89□□□□□ -0.67
VTI1A-208ENST00000494728 ERP44Q9BS26 406 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 PRDM9Q9NQV7 894 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 PCDHGB6Q9Y5F9 930 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 F8P00451 2351 aa10.89□□□□□ -0.67
VTI1A-208ENST00000494728 EXPH5Q8NEV8 1989 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 MYOCOSA0A1B0GUC4 107 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 LRIT2A6NDA9 550 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 PRSS44E7EML9 344 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 CCDC166P0CW27 439 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 GNAZP19086 355 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 EEF1DP29692 281 aaKnown RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 NR0B1P51843 470 aaKnown RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 MLF1P58340 268 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 BTN3A2P78410 334 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 POU4F1Q01851 419 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 OC90Q02509 493 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 ADPRMQ3LIE5 342 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 ZDHHC24Q6UX98 284 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 TMIGD1Q6UXZ0 262 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 C16orf47Q6ZP98 133 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 FGD2Q7Z6J4 655 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 PNPLA5Q7Z6Z6 429 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 RPS19BP1Q86WX3 136 aaKnown RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 LGI4Q8N135 537 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 TBC1D19Q8N5T2 526 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 SPATA4Q8NEY3 305 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 THAP3Q8WTV1 239 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 PYROXD1Q8WU10 500 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 SREK1Q8WXA9 508 aaKnown RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 CCT6BQ92526 530 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 PHF3Q92576 2039 aaKnown RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 EXT2Q93063 718 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 MARVELD3Q96A59 401 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 UBXN10Q96LJ8 280 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 GPR137Q96N19 417 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 WWOXQ9NZC7 414 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 WHRNQ9P202 907 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 LRFN1Q9P244 771 aa10.88□□□□□ -0.67
VTI1A-208ENST00000494728 ZNF490Q9ULM2 529 aaPredicted RBP10.88□□□□□ -0.67
VTI1A-208ENST00000494728 INTS1Q8N201 2190 aaKnown RBP10.87□□□□□ -0.67
VTI1A-208ENST00000494728 HCFC1P51610 2035 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 FREM3P0C091 2139 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 TRBV11-1A0A0K0K1C0 115 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 NPIPA5E9PKD4 350 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 CCL21O00585 134 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 NME2P1O60361 137 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 SLC25A12O75746 678 aa10.87□□□□□ -0.67
VTI1A-208ENST00000494728 MYO1DO94832 1006 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms