RNA–Protein interactions for RNA: ENST00000494465.5

ATG4B-225, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 2,365 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-225ENST00000494465 WBP11Q9Y2W2 641 aaKnown RBP15.76■□□□□ 0.11
ATG4B-225ENST00000494465 SPTY2D1-AS1A0A0U1RR47 76 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 ISM1B1AKI9 464 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 CLOCKO15516 846 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 TBX19O60806 448 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 STATHP02808 62 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 NUDT7P0C024 238 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 PPIBP23284 216 aaKnown RBP15.76■□□□□ 0.11
ATG4B-225ENST00000494465 CMPK1P30085 196 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 RGNQ15493 299 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 NHSL2Q5HYW2 709 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 TMTC4Q5T4D3 741 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 IYDQ6PHW0 289 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 SLC47A1Q96FL8 570 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 MACROD1Q9BQ69 325 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 Q9H521 79 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 MIEF1Q9NQG6 463 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 AP1M2Q9Y6Q5 423 aa15.76■□□□□ 0.11
ATG4B-225ENST00000494465 TDRD6O60522 2096 aaKnown RBP15.75■□□□□ 0.11
ATG4B-225ENST00000494465 A0A0A6YYD5 115 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 IGHV1OR15-9A0A0B4J2B8 117 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 A0A1W2PPC4 97 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 CCNDBP1O95273 360 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 RASAL1O95294 804 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 TNFP01375 233 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 SERPIND1P05546 499 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 GRK3P35626 688 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 AHRP35869 848 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 FZD2Q14332 565 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 DDX59Q5T1V6 619 aaKnown RBP eCLIP15.75■□□□□ 0.119e-11■■□□□ 13.2
ATG4B-225ENST00000494465 OR4C11Q6IEV9 310 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 FAM180BQ6P0A1 224 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 ERICH5Q6P6B1 374 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 ZNF793Q6ZN11 406 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 PHF6Q8IWS0 365 aaKnown RBP eCLIP15.75■□□□□ 0.11
ATG4B-225ENST00000494465 MFSD2AQ8NA29 543 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 PATE1Q8WXA2 126 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 QRFPRQ96P65 431 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 OSBPL11Q9BXB4 747 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 TPSD1Q9BZJ3 242 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 SRMSQ9H3Y6 488 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 MAGIXQ9H6Y5 334 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 SLAMF7Q9NQ25 335 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 PCDHGA4Q9Y5G9 962 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 A0A0G2JN53 185 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 A6NHS1 94 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 AXIN1O15169 862 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 CELA2BP08218 269 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-225ENST00000494465 PLA2G16P53816 162 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 ILF3Q12906 894 aaKnown RBP eCLIP15.75■□□□□ 0.11
ATG4B-225ENST00000494465 TMEM35AQ53FP2 167 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 ZNF542PQ5EBM4 170 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 PRRT3Q5FWE3 981 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 SFTPA2Q8IWL1 248 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 CHERPQ8IWX8 916 aaKnown RBP15.75■□□□□ 0.11
ATG4B-225ENST00000494465 NAGSQ8N159 534 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 MS4A6EQ96DS6 147 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 CDX2Q99626 313 aaPredicted RBP15.75■□□□□ 0.11
ATG4B-225ENST00000494465 C17orf62Q9BQA9 187 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 BDH2Q9BUT1 245 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 SPATA9Q9BWV2 254 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 LTB4R2Q9NPC1 389 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 TAS2R9Q9NYW1 312 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 DLGAP2Q9P1A6 1054 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 CORO2BQ9UQ03 480 aa15.75■□□□□ 0.11
ATG4B-225ENST00000494465 USP34Q70CQ2 3546 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 A0A1W2PRB8 838 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 SMNDC1O75940 238 aaKnown RBP eCLIP15.74■□□□□ 0.113e-6■□□□□ 9.1
ATG4B-225ENST00000494465 NTRK1P04629 796 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 THEGLP0DJG4 465 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 GSTM2P28161 218 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 GPR18Q14330 331 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 COX20Q5RI15 118 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 TBPL2Q6SJ96 375 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 PAQR7Q86WK9 346 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 MFSD9Q8NBP5 474 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 PYURFQ96I23 114 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 VPS50Q96JG6 964 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 CNBD2Q96M20 576 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 SLC35A5Q9BS91 424 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 FOXQ1Q9C009 403 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 TEX10Q9NXF1 929 aaPredicted RBP15.74■□□□□ 0.11
ATG4B-225ENST00000494465 SNX7Q9UNH6 387 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 KNL1Q8NG31 2342 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 GON4LQ3T8J9 2241 aa15.74■□□□□ 0.11
ATG4B-225ENST00000494465 DEAF1O75398 565 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-225ENST00000494465 CRYBA2P53672 197 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 VEZF1Q14119 521 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 UBXN2BQ14CS0 331 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 GALNT10Q86SR1 603 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 EID3Q8N140 333 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 OR10Q1Q8NGQ4 319 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 UCN3Q969E3 161 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 YY1AP1Q9H869 796 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 SCOCQ9UIL1 159 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 ACSL6Q9UKU0 697 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 EI24O14681 340 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 KDELR2P33947 212 aa15.73■□□□□ 0.11
ATG4B-225ENST00000494465 FRKP42685 505 aaPredicted RBP15.73■□□□□ 0.11
ATG4B-225ENST00000494465 GSTM5P46439 218 aa15.73■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 44 ms