RNA–Protein interactions for RNA: ENST00000493468.6

PRPF40A-211, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 1 (best)

Gene PRPF40A, Length 1,043 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-211ENST00000493468 HIVEP2P31629 2446 aa13.23□□□□□ -0.29
PRPF40A-211ENST00000493468 TCRBV7S2A1N4TA0A589 114 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 HSPB2A8KAH6 182 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 EIF3FO00303 357 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 NDUFS4O43181 175 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 CEP104O60308 925 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 DNAJB6O75190 326 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 IFNB1P01574 187 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 RNH1P13489 461 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 NPY2RP49146 381 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 GPR143P51810 404 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 DCAF7P61962 342 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 OLR1P78380 273 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 TBX2Q13207 712 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 HSPB2Q16082 182 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 BBS9Q3SYG4 887 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 WLSQ5T9L3 541 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 LCTLQ6UWM7 567 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 CYHR1Q6ZMK1 362 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 CHSY3Q70JA7 882 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 ABHD13Q7L211 337 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 CILP2Q8IUL8 1156 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 TMEM251Q8N6I4 163 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 UBL4BQ8N7F7 174 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 RELL2Q8NC24 303 aaPredicted RBP13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 ABHD11Q8NFV4 315 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 NT5CQ8TCD5 201 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 ATG4AQ8WYN0 398 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 KCNJ9Q92806 393 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 SLCO2A1Q92959 643 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 MFSD3Q96ES6 412 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 COX4I2Q96KJ9 171 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 FAM173AQ9BQD7 235 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 CCDC77Q9BR77 488 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 ATG10Q9H0Y0 220 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 IL1RL2Q9HB29 575 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 NECTIN3Q9NQS3 549 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 BFARQ9NZS9 450 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 PAK5Q9P286 719 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 ACAD8Q9UKU7 415 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 MMACHCQ9Y4U1 282 aa13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 FBN1P35555 2871 aaKnown RBP13.22□□□□□ -0.29
PRPF40A-211ENST00000493468 A0A0G2JMM0 328 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 A0A1W2PPB8 328 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 A0A1W2PRS3 328 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 GRID2IPA4D2P6 1211 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 KIR3DP1A8MWS1 328 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 MIF4GDA9UHW6 222 aaKnown RBP13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 DVL2O14641 736 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 LIASO43766 372 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 HCN1O60741 890 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 ZFAND5O76080 213 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 MYO1DO94832 1006 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 LY6G6DO95868 133 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 CDH1P12830 882 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 MAGEA5P43359 124 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 MAN2A2P49641 1150 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 CUL1Q13616 776 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 ARMC3Q5W041 872 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 KIAA0930Q6ICG6 404 aaPredicted RBP13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 UBE2R2Q712K3 238 aaPredicted RBP13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 CENPUQ71F23 418 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 SLC13A5Q86YT5 568 aaPredicted RBP13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 OR4K1Q8NGD4 311 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 ASB15Q8WXK1 588 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 AARSD1Q9BTE6 412 aaKnown RBP13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 SGPP1Q9BX95 441 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 ZNF395Q9H8N7 513 aaPredicted RBP13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 ZFATQ9P243 1243 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 MED16Q9Y2X0 877 aa13.21□□□□□ -0.29
PRPF40A-211ENST00000493468 ZANQ9Y493 2812 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 TRBC2A0A5B9 178 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 SYNDIG1LA6NDD5 238 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 A8MUA0 341 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 GOLGA8KD6RF30 607 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 GOLGA8TH3BQL2 631 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 PSMD12O00232 456 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 OR2J2O76002 312 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 OR6B1O95007 311 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 ZNF888P0CJ79 500 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 EPXP11678 715 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 CD53P19397 219 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 CNR1P21554 472 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 TACR1P25103 407 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 CYLC1P35663 651 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 CCR8P51685 355 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 NAP1L1P55209 391 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 NKX6-1P78426 367 aaPredicted RBP13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 RGS1Q08116 209 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 FOXO1Q12778 655 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 SCUBE1Q8IWY4 988 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 FBXW8Q8N3Y1 598 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 TC2NQ8N9U0 490 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 GOLM1Q8NBJ4 401 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 UTP15Q8TED0 518 aaKnown RBP13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 NCLNQ969V3 563 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 PDLIM2Q96JY6 352 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 HAUS8Q9BT25 410 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 SAMD15Q9P1V8 674 aa13.2□□□□□ -0.3
PRPF40A-211ENST00000493468 MYOTQ9UBF9 498 aa13.2□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms