RNA–Protein interactions for RNA: ENST00000493430.5

PTCD3-218, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 782 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-218ENST00000493430 ASS1P00966 412 aaKnown RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ANXA13P27216 316 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 HALP42357 657 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 PTGER3P43115 390 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 NR2C2P49116 596 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 VAMP7P51809 220 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 DSCR10P59022 87 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 COG7P83436 770 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 IL9RQ01113 521 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ADIGQ0VDE8 80 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 TRPC3Q13507 836 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 RUNX3Q13761 415 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 SIM2Q14190 667 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 DMC1Q14565 340 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 TMEM187Q14656 261 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 KIR2DS3Q14952 304 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 MAPRE1Q15691 268 aaKnown RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 KNOP1Q1ED39 458 aaKnown RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ITPRIPL2Q3MIP1 535 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 POM121L1PQ3SYA9 428 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 NAA35Q5VZE5 725 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 TMEM215Q68D42 235 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 FAAP20Q6NZ36 180 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 RFWD3Q6PCD5 774 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 DENND5BQ6ZUT9 1274 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 PIGZQ86VD9 579 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF354CQ86Y25 554 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 NRROSQ86YC3 692 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 CREBRFQ8IUR6 639 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 CEP57L1Q8IYX8 460 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 THEM5Q8N1Q8 247 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 LRRC52Q8N7C0 313 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 IQUBQ8NA54 791 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 SLC4A11Q8NBS3 891 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ZBTB44Q8NCP5 570 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 OR52K2Q8NGK3 314 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 SPPL2BQ8TCT7 592 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ZNF473Q8WTR7 871 aaKnown RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 MRPS31Q92665 395 aaKnown RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 DNASE1L2Q92874 299 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 CLDN23Q96B33 292 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 KLHL15Q96M94 604 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 PRICKLE1Q96MT3 831 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 GCNAQ96QF7 691 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 FNBP1Q96RU3 617 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ULBP1Q9BZM6 244 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 MIS12Q9H081 205 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 LRMDAQ9H2I8 198 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ZSCAN16Q9H4T2 348 aaPredicted RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ASB7Q9H672 318 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 FGF22Q9HCT0 170 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 SLC7A10Q9NS82 523 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 DMAC2Q9NW81 257 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ADPRHL2Q9NX46 363 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 PPP1R14DQ9NXH3 145 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 GDAP2Q9NXN4 497 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 COX16Q9P0S2 106 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 LUZP4Q9P127 313 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 ACAD8Q9UKU7 415 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 EXOC7Q9UPT5 735 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 AAR2Q9Y312 384 aaKnown RBP2.87□□□□□ -1.95
PTCD3-218ENST00000493430 JRKLQ9Y4A0 524 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 LAMA1P25391 3075 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 UBE4BO95155 1302 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 FRYQ5TBA9 3013 aa2.87□□□□□ -1.95
PTCD3-218ENST00000493430 APC2O95996 2303 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 ACACAQ13085 2346 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DOCK10Q96BY6 2186 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 FAM237AA0A1B0GTK4 181 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 SPAARA0A1B0GVQ0 90 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 TCRBV21S2A2A0A5A6 115 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 LNP1A1A4G5 178 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 FSD2A1L4K1 749 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DUXAA6NLW8 204 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 YJEFN3A6XGL0 299 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 E7ENQ6 273 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 H0YCG3 227 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 IFNL4K9M1U5 179 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 EPHB6O15197 1021 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 KCNN4O15554 427 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 KINO60870 393 aaKnown RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 PDE9AO76083 593 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 OLFM2O95897 454 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 MOCS2O96007 188 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CSH1P0DML2 217 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CSH2P0DML3 217 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CCDC192P0DO97 292 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 RARGP13631 454 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 GABRG2P18507 467 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 AZU1P20160 251 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CMA1P23946 247 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CDC25CP30307 473 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CD70P32970 193 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CXCL12P48061 93 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DHPSP49366 369 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 STK19P49842 368 aaPredicted RBP2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CLDN20P56880 219 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 CREB5Q02930 508 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 RUNX1T1Q06455 604 aa2.86□□□□□ -1.95
PTCD3-218ENST00000493430 DRAP1Q14919 205 aaPredicted RBP2.86□□□□□ -1.95
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms