RNA–Protein interactions for RNA: ENST00000492883.5

CCM2-217, Transcript of CCM2 scaffold protein, humanhuman

TSL 2

Gene CCM2, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-217ENST00000492883 RAP1GDS1P52306 607 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 MTTPP55157 894 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 ATP1A4Q13733 1029 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 C10orf62Q5T681 223 aaPredicted RBP13.2□□□□□ -0.3
CCM2-217ENST00000492883 FAAH2Q6GMR7 532 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 PPP1R32Q7Z5V6 425 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 MRGPREQ86SM8 312 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 SHISA5Q8N114 240 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 CDYL2Q8N8U2 506 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 METTL6Q8TCB7 284 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 SELENOMQ8WWX9 145 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 SREK1Q8WXA9 508 aaKnown RBP13.2□□□□□ -0.3
CCM2-217ENST00000492883 METTL21AQ8WXB1 218 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 TTC9Q92623 222 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 RGMAQ96B86 450 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 TBC1D20Q96BZ9 403 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 FER1L6-AS2Q96M78 137 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 OR1F2PQ96R84 312 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 UBL7Q96S82 380 aaPredicted RBP13.2□□□□□ -0.3
CCM2-217ENST00000492883 SERINC2Q96SA4 455 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 TBCDQ9BTW9 1192 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 NPLQ9BXD5 320 aaPredicted RBP13.2□□□□□ -0.3
CCM2-217ENST00000492883 RBCK1Q9BYM8 510 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 GSTO2Q9H4Y5 243 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 MID1IP1Q9NPA3 183 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 KCNK9Q9NPC2 374 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 PRDM7Q9NQW5 492 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 P4HTMQ9NXG6 502 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 PSD3Q9NYI0 1048 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 KCNMB2Q9Y691 235 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 FREM2Q5SZK8 3169 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 CHD8Q9HCK8 2581 aa13.2□□□□□ -0.3
CCM2-217ENST00000492883 TPRP12270 2363 aaKnown RBP13.19□□□□□ -0.3
CCM2-217ENST00000492883 AGPSO00116 658 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 RTCAO00442 366 aaKnown RBP13.19□□□□□ -0.3
CCM2-217ENST00000492883 B4GALT2O60909 372 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 CRCPO75575 148 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 CDC123O75794 336 aaPredicted RBP13.19□□□□□ -0.3
CCM2-217ENST00000492883 KRT6AP02538 564 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 KRT6BP04259 564 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 FHP07954 510 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 RNH1P13489 461 aaKnown RBP13.19□□□□□ -0.3
CCM2-217ENST00000492883 JAK1P23458 1154 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 HMOX2P30519 316 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 KRT6CP48668 564 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 RRADP55042 308 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 PKNOX1P55347 436 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 RUNX2Q13950 521 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 PCLAFQ15004 111 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 LINC00303Q3SY05 128 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 TNFAIP8L3Q5GJ75 292 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 OR4C11Q6IEV9 310 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 MED25Q71SY5 747 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 UBE3DQ7Z6J8 389 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 CA13Q8N1Q1 262 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 TMEM102Q8N9M5 508 aaPredicted RBP13.19□□□□□ -0.3
CCM2-217ENST00000492883 QRFPRQ96P65 431 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 SERPINI1Q99574 410 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 ING2Q9H160 280 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 SSU72Q9NP77 194 aaKnown RBP13.19□□□□□ -0.3
CCM2-217ENST00000492883 ZNF225Q9UK10 706 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 ACTL7BQ9Y614 415 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 HS3ST3B1Q9Y662 390 aa13.19□□□□□ -0.3
CCM2-217ENST00000492883 OR2W5A6NFC9 320 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 FAM227AF5H4B4 570 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 H3BQF6 201 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 SOCS6O14544 535 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 ALOX12BO75342 701 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 ULK1O75385 1050 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 ESRRBO95718 433 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 PDYNP01213 254 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 ENO1P06733 434 aaKnown RBP13.18□□□□□ -0.3
CCM2-217ENST00000492883 C8orf89P0DMQ9 161 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 ACPPP15309 386 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 HIST1H1TP22492 207 aaPredicted RBP13.18□□□□□ -0.3
CCM2-217ENST00000492883 ATP5A1P25705 553 aaKnown RBP13.18□□□□□ -0.3
CCM2-217ENST00000492883 CERS1P27544 350 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 SSR2P43308 183 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 CCL11P51671 97 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 POLE2P56282 527 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 CHAF1BQ13112 559 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 CUL3Q13618 768 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 RCN2Q14257 317 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 TUBB8Q3ZCM7 444 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 KIRREL2Q6UWL6 708 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 FRMD7Q6ZUT3 714 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 HDXQ7Z353 690 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 APLFQ8IW19 511 aaPredicted RBP13.18□□□□□ -0.3
CCM2-217ENST00000492883 ACOT4Q8N9L9 421 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 C8orf44Q96CB5 159 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 CNDP1Q96KN2 507 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 MECRQ9BV79 373 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 GATA5Q9BWX5 397 aaPredicted RBP13.18□□□□□ -0.3
CCM2-217ENST00000492883 SORBS1Q9BX66 1292 aaKnown RBP13.18□□□□□ -0.3
CCM2-217ENST00000492883 VN1R1Q9GZP7 353 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 TMBIM4Q9HC24 238 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 FARSBQ9NSD9 589 aaKnown RBP13.18□□□□□ -0.3
CCM2-217ENST00000492883 NMRK1Q9NWW6 199 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 AHSPQ9NZD4 102 aa13.18□□□□□ -0.3
CCM2-217ENST00000492883 SLC12A4Q9UP95 1085 aa13.18□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms