RNA–Protein interactions for RNA: ENST00000491288.5

DNMT3A-214, Transcript of DNA methyltransferase 3 alpha, humanhuman

TSL 3

Gene DNMT3A, Length 472 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DNMT3A-214ENST00000491288 C14orf105Q9NVL8 296 aa12.8□□□□□ -0.36
DNMT3A-214ENST00000491288 OXSMQ9NWU1 459 aa12.8□□□□□ -0.36
DNMT3A-214ENST00000491288 NMRK1Q9NWW6 199 aa12.8□□□□□ -0.36
DNMT3A-214ENST00000491288 SNX6Q9UNH7 406 aa12.8□□□□□ -0.36
DNMT3A-214ENST00000491288 TSC22D4Q9Y3Q8 395 aa12.8□□□□□ -0.36
DNMT3A-214ENST00000491288 H3BQF6 201 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 PSMD12O00232 456 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 TRIM13O60858 407 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 CRCPO75575 148 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 KLF7O75840 302 aaPredicted RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 TSPAN8P19075 237 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 HMOX2P30519 316 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 RAP1GDS1P52306 607 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 NAGLUP54802 743 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 EMP2P54851 167 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 PKNOX1P55347 436 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 MAT1AQ00266 395 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 RCN2Q14257 317 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 LIPMQ5VYY2 423 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 SHISA6Q6ZSJ9 500 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 GPRIN3Q6ZVF9 776 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 COX15Q7KZN9 410 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 HDXQ7Z353 690 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 EXOC3L1Q86VI1 746 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 PTRH1Q86Y79 214 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 PRSS58Q8IYP2 241 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 ARHGEF39Q8N4T4 335 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 AFAP1L2Q8N4X5 818 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 DTWD1Q8N5C7 304 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 OR4F6Q8NGB9 312 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 OR52B6Q8NGF0 335 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 HUS1BQ8NHY5 278 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 ZNF473Q8WTR7 871 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 APOBEC4Q8WW27 367 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 METTL21AQ8WXB1 218 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 RGMAQ96B86 450 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 NACC2Q96BF6 587 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 ABHD17AQ96GS6 310 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 TMEM237Q96Q45 408 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 F2RL3Q96RI0 385 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 MTERF1Q99551 399 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 TBCDQ9BTW9 1192 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 CRB3Q9BUF7 120 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 TGIF2Q9GZN2 237 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 C12orf65Q9H3J6 166 aaKnown RBP12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 ZBTB26Q9HCK0 441 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 SEMA3GQ9NS98 782 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 PSD3Q9NYI0 1048 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 HCN3Q9P1Z3 774 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 CTSFQ9UBX1 484 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 MAN2B2Q9Y2E5 1009 aa12.79□□□□□ -0.36
DNMT3A-214ENST00000491288 IGLV3-12A0A075B6K2 115 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 VSTM2BA6NLU5 285 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 FOXE1O00358 373 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 FFAR3O14843 346 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 PCDH17O14917 1159 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 GPR42O15529 346 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 CHST10O43529 356 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 B3GALT2O43825 422 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SH3BGRLO75368 114 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 RDH16O75452 317 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 OR4F21O95013 312 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 KRT6AP02538 564 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 KRT6BP04259 564 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SMIM10L1P0DMW3 83 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 NEFHP12036 1026 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 XCR1P46094 333 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 KRT6CP48668 564 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 RRADP55042 308 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 MTTPP55157 894 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 KLC1Q07866 573 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 HYAL2Q12891 473 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 LCP2Q13094 533 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SYT16Q17RD7 645 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SGO1Q5FBB7 561 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 DEPDC1Q5TB30 811 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 KHDRBS2Q5VWX1 349 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 FRG2Q64ET8 278 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 RPS27LQ71UM5 84 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 PRSS41Q7RTY9 318 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 HOMEZQ8IX15 550 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 GOLGA6L1Q8N7Z2 621 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 AMER3Q8N944 861 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 PPP1R14CQ8TAE6 165 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 C9orf43Q8TAL5 461 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 METTL6Q8TCB7 284 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 ZBTB9Q96C00 473 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SMIM10Q96HG1 83 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 PKNOX2Q96KN3 472 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 FER1L6-AS2Q96M78 137 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 KCNC2Q96PR1 638 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 FRG2BQ96QU4 278 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SERINC2Q96SA4 455 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 ZNF382Q96SR6 550 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SERPINI1Q99574 410 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 NPLQ9BXD5 320 aaPredicted RBP12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 MS4A8Q9BY19 250 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 SSU72Q9NP77 194 aaKnown RBP12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 AHSPQ9NZD4 102 aa12.78□□□□□ -0.36
DNMT3A-214ENST00000491288 TRPS1Q9UHF7 1281 aa12.78□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms