RNA–Protein interactions for RNA: ENST00000490910.5

CRNKL1-204, Transcript of crooked neck pre-mRNA splicing factor 1, humanhuman

TSL 1 (best)

Gene CRNKL1, Length 4,183 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRNKL1-204ENST00000490910 PYCR3Q53H96 274 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 RETSATQ6NUM9 610 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 DTX3Q8N9I9 347 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 ST6GAL2Q96JF0 529 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 OR5M11Q96RB7 305 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 SLC35A5Q9BS91 424 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 IFT27Q9BW83 186 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 TAS2R16Q9NYV7 291 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 TRPS1Q9UHF7 1281 aa10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 MARF1Q9Y4F3 1742 aaKnown RBP10.89□□□□□ -0.67
CRNKL1-204ENST00000490910 EPOP01588 193 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 PBLDP30039 288 aaPredicted RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 CDH4P55283 916 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 SPOUT1Q5T280 376 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 TIGD3Q6B0B8 471 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 FAM198BQ6UWH4 519 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 LINGO2Q7L985 606 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 OXR1Q8N573 874 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 OR7D4Q8NG98 312 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 OR51J1Q9H342 316 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 GALNT9Q9HCQ5 603 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF69Q9UC07 566 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 IRAK3Q9Y616 596 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 HS3ST4Q9Y661 456 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 COL1A2P08123 1366 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 C17orf102A2RUQ5 167 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 KLRG2A4D1S0 409 aaPredicted RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 SLC43A1O75387 559 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 BMP7P18075 431 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 VLDLRP98155 873 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 CAMK1Q14012 370 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 KRT33BQ14525 404 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 GRK1Q15835 563 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 KIAA1161Q6NSJ0 714 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF782Q6ZMW2 699 aaPredicted RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 MACC1Q6ZN28 852 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 C16orf59Q7L2K0 433 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 NPAS3Q8IXF0 933 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 DNAJC5GQ8N7S2 189 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 OR9Q2Q8NGE9 314 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 OR2T11Q8NH01 316 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 OR4K3Q96R72 315 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 UTS2RQ9UKP6 389 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 NDRG4Q9ULP0 352 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 MGAT4BQ9UQ53 548 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 OR1I1O60431 355 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 HTR1AP08908 422 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 APEX1P27695 318 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 TPMTP51580 245 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 MANFP55145 182 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 TAS2R41P59536 307 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 PSMA6P60900 246 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 Q6ZSR9 355 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 PDZD9Q8IXQ8 264 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 RBPMSQ93062 196 aaKnown RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 PSKH2Q96QS6 385 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 PIP5K1AQ99755 562 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 NLE1Q9NVX2 485 aaPredicted RBP10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 NUP205Q92621 2012 aa10.88□□□□□ -0.67
CRNKL1-204ENST00000490910 RPS19P39019 145 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SMSP52788 366 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 C19orf57Q0VDD7 668 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 GPR50Q13585 617 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZMYND11Q15326 602 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 CTXN3Q4LDR2 81 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 NOXRED1Q6NXP6 359 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF730Q6ZMV8 503 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ERVMER34-1Q9H9K5 563 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZFYVE1Q9HBF4 777 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 TAS2R3Q9NYW6 316 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PRKYO43930 277 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SSX4O60224 188 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 RPS12P25398 132 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 HNMTP50135 292 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 MICAQ29983 383 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 TMEM44Q2T9K0 475 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 YIF1BQ5BJH7 314 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SLC35F1Q5T1Q4 408 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF697Q5TEC3 545 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SERPINA11Q86U17 422 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZNF416Q9BWM5 594 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ACTR6Q9GZN1 396 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ARL6Q9H0F7 186 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 C12orf10Q9HB07 376 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 SLC39A1Q9NY26 324 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ZFR2Q9UPR6 939 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 EXOSC1Q9Y3B2 195 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 ASB4Q9Y574 426 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PCDHB11Q9Y5F2 797 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 LOXHD1Q8IVV2 1947 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 H7C0S8 307 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PEX10O60683 326 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PRSS56P0CW18 603 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 TNFRSF1BP20333 461 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 DGKGP49619 791 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PSPHP78330 225 aa10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 PTGES3Q15185 160 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 DALRD3Q5D0E6 543 aaKnown RBP10.87□□□□□ -0.67
CRNKL1-204ENST00000490910 TMEM179BQ7Z7N9 219 aa10.87□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms