RNA–Protein interactions for RNA: ENST00000489303.1

LMO4-203, Transcript of LIM domain only 4, humanhuman

TSL 2

Gene LMO4, Length 952 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMO4-203ENST00000489303 SCYL1Q96KG9 808 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 CNDP1Q96KN2 507 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 LPAR4Q99677 370 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 NPLQ9BXD5 320 aaPredicted RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 SLC29A3Q9BZD2 475 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 ROGDIQ9GZN7 287 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 REXO4Q9GZR2 422 aaKnown RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 RHBGQ9H310 441 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 COPS7BQ9H9Q2 264 aaPredicted RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 ZBTB20Q9HC78 741 aaPredicted RBP12.72□□□□□ -0.37
LMO4-203ENST00000489303 PTGFRNQ9P2B2 879 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 TMCO1Q9UM00 188 aa12.72□□□□□ -0.37
LMO4-203ENST00000489303 A1L4Q6 167 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 LRIT2A6NDA9 550 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 B3GALT2O43825 422 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 PRMT3O60678 531 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 AGFG2O95081 481 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 ABHD2P08910 425 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 SNRPAP09012 282 aaKnown RBP12.71□□□□□ -0.37
LMO4-203ENST00000489303 MYBL2P10244 700 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 PCNAP12004 261 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 COL6A2P12110 1019 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 CASP2P42575 452 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 PIK3CGP48736 1102 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 PLA2G16P53816 162 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 OR4D2P58180 307 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 ARG2P78540 354 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 RHAGQ02094 409 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 SETDB1Q15047 1291 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 TLR1Q15399 786 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 BTBD16Q32M84 506 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 C4orf17Q53FE4 359 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 SFT2D3Q587I9 215 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 UBAP2Q5T6F2 1119 aaKnown RBP12.71□□□□□ -0.37
LMO4-203ENST00000489303 MED27Q6P2C8 311 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 MYLK4Q86YV6 388 aaPredicted RBP12.71□□□□□ -0.37
LMO4-203ENST00000489303 LURAP1LQ8IV03 231 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 SIRT6Q8N6T7 355 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 TEX9Q8N6V9 391 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 GALNT11Q8NCW6 608 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 OR2L5Q8NG80 312 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 ADAMTS18Q8TE60 1221 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 ISL2Q96A47 359 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 MS4A6EQ96DS6 147 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 IMMP1LQ96LU5 166 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 PTCHD1Q96NR3 888 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 CCDC77Q9BR77 488 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 LANCL2Q9NS86 450 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 CPSF2Q9P2I0 782 aaKnown RBP12.71□□□□□ -0.37
LMO4-203ENST00000489303 ADGRE2Q9UHX3 823 aa12.71□□□□□ -0.37
LMO4-203ENST00000489303 ZNF490Q9ULM2 529 aaPredicted RBP12.71□□□□□ -0.37
LMO4-203ENST00000489303 MRPS33Q9Y291 106 aaKnown RBP12.71□□□□□ -0.37
LMO4-203ENST00000489303 SPTAN1Q13813 2472 aaKnown RBP12.7□□□□□ -0.38
LMO4-203ENST00000489303 IGHV3-20A0A0C4DH32 117 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 OR2W5A6NFC9 320 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 TRIM49D1C9J1S8 452 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 CLDN4O14493 209 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 SMIM24O75264 130 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 MTHFD2P13995 350 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 COL8A1P27658 744 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 PHEXP78562 749 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 NAA30Q147X3 362 aaPredicted RBP12.7□□□□□ -0.38
LMO4-203ENST00000489303 ZNF169Q14929 603 aaPredicted RBP12.7□□□□□ -0.38
LMO4-203ENST00000489303 FHL5Q5TD97 284 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 ABHD17BQ5VST6 288 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 PLAG1Q6DJT9 500 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 GRHL2Q6ISB3 625 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 METTL2BQ6P1Q9 378 aaKnown RBP12.7□□□□□ -0.38
LMO4-203ENST00000489303 PAPD4Q6PIY7 484 aaKnown RBP12.7□□□□□ -0.38
LMO4-203ENST00000489303 QSOX2Q6ZRP7 698 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 CHSY3Q70JA7 882 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 CA13Q8N1Q1 262 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 M1APQ8TC57 530 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 DCAKDQ8WVC6 231 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 REPS1Q96D71 796 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 MTBPQ96DY7 904 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 MAGEB10Q96LZ2 347 aaPredicted RBP12.7□□□□□ -0.38
LMO4-203ENST00000489303 KCNC2Q96PR1 638 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 SERINC2Q96SA4 455 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 CENPKQ9BS16 269 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 ACTR8Q9H981 624 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 PRDM9Q9NQV7 894 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 ABI3Q9P2A4 366 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 PLEKHB1Q9UF11 243 aaPredicted RBP12.7□□□□□ -0.38
LMO4-203ENST00000489303 ASB1Q9Y576 335 aa12.7□□□□□ -0.38
LMO4-203ENST00000489303 A0A0G2JN53 185 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 IQANK1A0A1B0GTG1 560 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 SYNDIG1LA6NDD5 238 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 A8MUI8 341 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 RIPK2O43353 540 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 KLK8O60259 260 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 PRAMEF4O60810 478 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 DNAJB6O75190 326 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 ITGAMP11215 1152 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 EPORP19235 508 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 CD22P20273 847 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 HNRNPH1P31943 449 aaKnown RBP12.69□□□□□ -0.38
LMO4-203ENST00000489303 SOX11P35716 441 aa12.69□□□□□ -0.38
LMO4-203ENST00000489303 ARL1P40616 181 aaPredicted RBP12.69□□□□□ -0.38
LMO4-203ENST00000489303 MAGEA12P43365 314 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms