RNA–Protein interactions for RNA: ENST00000489037.1

BRCA1-218, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 4

Gene BRCA1, Length 455 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-218ENST00000489037 PTCHD1Q96NR3 888 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 LMF1Q96S06 567 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 SERINC2Q96SA4 455 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 LPAR4Q99677 370 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 ILKAPQ9H0C8 392 aaPredicted RBP13.46□□□□□ -0.25
BRCA1-218ENST00000489037 IPPKQ9H8X2 491 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 PPCSQ9HAB8 311 aa13.46□□□□□ -0.25
BRCA1-218ENST00000489037 MRPS33Q9Y291 106 aaKnown RBP13.46□□□□□ -0.25
BRCA1-218ENST00000489037 HELZ2Q9BYK8 2649 aaKnown RBP13.45□□□□□ -0.26
BRCA1-218ENST00000489037 BAHCC1Q9P281 2608 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 A0A0G2JN53 185 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 STX16-NPEPL1H3BU86 382 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 CLDN4O14493 209 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 STX16O14662 325 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 ZNF500O60304 480 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-218ENST00000489037 PRAMEF4O60810 478 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 SEC24DO94855 1032 aaPredicted RBP13.45□□□□□ -0.26
BRCA1-218ENST00000489037 WISP1O95388 367 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 PRR35P0CG20 571 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 CD22P20273 847 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 EEF1DP29692 281 aaKnown RBP13.45□□□□□ -0.26
BRCA1-218ENST00000489037 HNRNPH1P31943 449 aaKnown RBP13.45□□□□□ -0.26
BRCA1-218ENST00000489037 CCNG1P51959 295 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 MTTPP55157 894 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 OR4D2P58180 307 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 RHAGQ02094 409 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 KCNC4Q03721 635 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 Q0VFX4 171 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 DDX39BQ13838 428 aaKnown RBP13.45□□□□□ -0.26
BRCA1-218ENST00000489037 E2F2Q14209 437 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 EXT1Q16394 746 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 ADPRMQ3LIE5 342 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 TMEM35AQ53FP2 167 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 PRAMEF9Q5VWM5 478 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 QSOX2Q6ZRP7 698 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 LANCL3Q6ZV70 420 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 GOLGA7Q7Z5G4 137 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 LAS2Q8IYD9 372 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 CA13Q8N1Q1 262 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 RBMXL3Q8N7X1 1067 aaKnown RBP13.45□□□□□ -0.26
BRCA1-218ENST00000489037 OR7G3Q8NG95 312 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 ACMSDQ8TDX5 336 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 CMTM7Q96FZ5 175 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 KCNC2Q96PR1 638 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 F2RL3Q96RI0 385 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 MESP1Q9BRJ9 268 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 LANCL2Q9NS86 450 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 PTGFRNQ9P2B2 879 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 MAP10Q9P2G4 905 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 TBK1Q9UHD2 729 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 TEKT2Q9UIF3 430 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 B3GNT3Q9Y2A9 372 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 SPACA6W5XKT8 324 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 BSNQ9UPA5 3926 aa13.45□□□□□ -0.26
BRCA1-218ENST00000489037 IGHV3-20A0A0C4DH32 117 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 DYTNA2CJ06 578 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 OR2W5A6NFC9 320 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 SIX3O95343 332 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-218ENST00000489037 SLU7O95391 586 aaKnown RBP13.44□□□□□ -0.26
BRCA1-218ENST00000489037 CLDN9O95484 217 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 TGFB1P01137 390 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 GCAP28676 217 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 RAP1GDS1P52306 607 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 MLLT10P55197 1068 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 RAB38P57729 211 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 MFAP5Q13361 173 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 AP5B1Q2VPB7 878 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 BTBD16Q32M84 506 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 SFT2D3Q587I9 215 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 SLC6A19Q695T7 634 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 ABHD17CQ6PCB6 329 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 LINC00696Q6ZRV3 163 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 VN1R5Q7Z5H4 357 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 ATCAYQ86WG3 371 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 IQCKQ8N0W5 287 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 CYP4X1Q8N118 509 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 DNAJB14Q8TBM8 379 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 BRIX1Q8TDN6 353 aaKnown RBP13.44□□□□□ -0.26
BRCA1-218ENST00000489037 PPP4R1Q8TF05 950 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 ZNF473Q8WTR7 871 aaKnown RBP13.44□□□□□ -0.26
BRCA1-218ENST00000489037 IMMP1LQ96LU5 166 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 MAGEB10Q96LZ2 347 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-218ENST00000489037 WDR77Q9BQA1 342 aaPredicted RBP13.44□□□□□ -0.26
BRCA1-218ENST00000489037 TBCDQ9BTW9 1192 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 MS4A8Q9BY19 250 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 NOL11Q9H8H0 719 aaKnown RBP13.44□□□□□ -0.26
BRCA1-218ENST00000489037 PRDM9Q9NQV7 894 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 DCDC2Q9UHG0 476 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 MMACHCQ9Y4U1 282 aa13.44□□□□□ -0.26
BRCA1-218ENST00000489037 SYNDIG1LA6NDD5 238 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 LRRC14BA6NHZ5 514 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 PYCARD-AS1I3L0S3 204 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 E2F3O00716 465 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 DNAJB6O75190 326 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 GSTA1P08263 222 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 MYBL2P10244 700 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 KRT15P19012 456 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 PIK3CBP42338 1070 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 ARG2P78540 354 aa13.43□□□□□ -0.26
BRCA1-218ENST00000489037 RUNX2Q13950 521 aa13.43□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 48.8 ms