RNA–Protein interactions for RNA: ENST00000488834.5

SSR1-209, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 4

Gene SSR1, Length 585 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-209ENST00000488834 PIK3R1P27986 724 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 FEN1P39748 380 aaKnown RBP3.25□□□□□ -1.89
SSR1-209ENST00000488834 KRT83P78385 493 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 FOLH1Q04609 750 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 WASHC5Q12768 1159 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SCARB2Q14108 478 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 ZNF146Q15072 292 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 ARMCX4Q5H9R4 360 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SPANXN4Q5MJ08 99 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SPINK14Q6IE38 97 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 TCEAL6Q6IPX3 200 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 ZNF774Q6NX45 483 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 MSANTD1Q6ZTZ1 278 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 C5orf24Q7Z6I8 188 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SLC47A2Q86VL8 602 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 HSCBQ8IWL3 235 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SPAG16Q8N0X2 631 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 ZNF713Q8N859 430 aaPredicted RBP3.25□□□□□ -1.89
SSR1-209ENST00000488834 C17orf47Q8NEP4 570 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 GOT1L1Q8NHS2 421 aaPredicted RBP3.25□□□□□ -1.89
SSR1-209ENST00000488834 ERO1AQ96HE7 468 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 TSPAN18Q96SJ8 248 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 MTIF3Q9H2K0 278 aaKnown RBP3.25□□□□□ -1.89
SSR1-209ENST00000488834 JPT2Q9H910 190 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 LMAN1LQ9HAT1 526 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 SLC7A10Q9NS82 523 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 THAP10Q9P2Z0 257 aaPredicted RBP3.25□□□□□ -1.89
SSR1-209ENST00000488834 ARMCX3Q9UH62 379 aaPredicted RBP3.25□□□□□ -1.89
SSR1-209ENST00000488834 ITGA11Q9UKX5 1188 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 RARRES3Q9UL19 164 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 PCDHGA1Q9Y5H4 931 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 KLK4Q9Y5K2 254 aa3.25□□□□□ -1.89
SSR1-209ENST00000488834 C5orf52A6NGY3 159 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 TNFSF12O43508 249 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 LRCH4O75427 683 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 FAM200BP0CF97 657 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 DLATP10515 647 aaKnown RBP3.24□□□□□ -1.89
SSR1-209ENST00000488834 CD1DP15813 335 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 CSRP3P50461 194 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 RIGQ13278 110 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 PEX6Q13608 980 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 UPP1Q16831 310 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 SLC27A4Q6P1M0 643 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 Q6ZVQ6 151 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 RFPL4BQ6ZWI9 263 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 ERC1Q8IUD2 1116 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 DND1Q8IYX4 353 aaKnown RBP3.24□□□□□ -1.89
SSR1-209ENST00000488834 KIAA0895Q8NCT3 520 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 UBLCP1Q8WVY7 318 aaPredicted RBP3.24□□□□□ -1.89
SSR1-209ENST00000488834 LURAP1Q96LR2 239 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 MYCBPQ99417 103 aaPredicted RBP3.24□□□□□ -1.89
SSR1-209ENST00000488834 ZNF577Q9BSK1 485 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 STRADBQ9C0K7 418 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 PNNQ9H307 717 aaKnown RBP3.24□□□□□ -1.89
SSR1-209ENST00000488834 CHMP4BQ9H444 224 aaKnown RBP3.24□□□□□ -1.89
SSR1-209ENST00000488834 SP140LQ9H930 580 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 UBE2TQ9NPD8 197 aaPredicted RBP3.24□□□□□ -1.89
SSR1-209ENST00000488834 SNX5Q9Y5X3 404 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 AUP1Q9Y679 476 aa3.24□□□□□ -1.89
SSR1-209ENST00000488834 IGHV3-20A0A0C4DH32 117 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 IGHV3-38A0A0C4DH36 116 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 YDJCA8MPS7 323 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 SHISA9B4DS77 424 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 KBTBD13C9JR72 458 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 ZNF749O43361 778 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 GRAP2O75791 330 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 ZFYP08048 801 aaPredicted RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 CASTP20810 708 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 RPL9P32969 192 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 TNNT3P45378 269 aaPredicted RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 ATP4BP51164 291 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 RIDAP52758 137 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 NDUFV3P56181 108 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 RPP38P78345 283 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 SRPXP78539 464 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 CNTN1Q12860 1018 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 SLC10A5Q5PT55 438 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 LCE3CQ5T5A8 94 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 C17orf107Q6ZR85 190 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 ANKRD46Q86W74 232 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 SLC39A11Q8N1S5 342 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 ELMOD1Q8N336 334 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 SMYD1Q8NB12 490 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 ZDHHC19Q8WVZ1 309 aaPredicted RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 DNASE1L2Q92874 299 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 JAKMIP1Q96N16 626 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 RBM24Q9BX46 236 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 TRIM7Q9C029 511 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 LSG1Q9H089 658 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 C5orf66Q9H5L9 145 aa3.23□□□□□ -1.89
SSR1-209ENST00000488834 MRPS18CQ9Y3D5 142 aaKnown RBP3.23□□□□□ -1.89
SSR1-209ENST00000488834 A0A0B4J203 849 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 GTPBP10A4D1E9 387 aaKnown RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 TMCO5BA8MYB1 307 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 RNF103O00237 685 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 IFIT3O14879 490 aaKnown RBP3.22□□□□□ -1.89
SSR1-209ENST00000488834 CTDSPLO15194 276 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 STX6O43752 255 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 SCO2O43819 266 aa3.22□□□□□ -1.89
SSR1-209ENST00000488834 SELENOFO60613 162 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 61.1 ms