RNA–Protein interactions for RNA: ENST00000487354.1

MCF2L-228, Transcript of MCF.2 cell line derived transforming sequence like, humanhuman

TSL 3

Gene MCF2L, Length 553 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2L-228ENST00000487354 PPP2R1BP30154 601 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 CCNG2Q16589 344 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 XKR6Q5GH73 641 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 ANKRD22Q5VYY1 191 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 STRA8Q7Z7C7 330 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 KIAA1328Q86T90 577 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 SCUBE1Q8IWY4 988 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 ANKRD53Q8N9V6 530 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 SMR3AQ99954 134 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 DESI2Q9BSY9 194 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 TRIM5Q9C035 493 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 SLC6A16Q9GZN6 736 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 CLEC4MQ9H2X3 399 aaPredicted RBP14.27□□□□□ -0.13
MCF2L-228ENST00000487354 SLC24A3Q9HC58 644 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 RASSF1Q9NS23 344 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 ZFATQ9P243 1243 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 FREM3P0C091 2139 aa14.27□□□□□ -0.13
MCF2L-228ENST00000487354 A0A1B0GVC2 190 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 SLC16A5O15375 505 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 OR1F1O43749 312 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 MYO1DO94832 1006 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 OR6B1O95007 311 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 CELA3AP09093 270 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 MAGEA6P43360 314 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 SCTRP47872 440 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 ZFP36L2P47974 494 aaKnown RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 CLCN2P51788 898 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 PPIAP62937 165 aaKnown RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 DHX9Q08211 1270 aaKnown RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 DHX34Q14147 1143 aaKnown RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 TERF2Q15554 542 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 CATSPEREQ5SY80 951 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 ARSKQ6UWY0 536 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 KRTAP1-3Q8IUG1 177 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 CA13Q8N1Q1 262 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 TMEM156Q8N614 296 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 TMEM52Q8NDY8 209 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 EEF1AKMT1Q8WVE0 214 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 SLCO2A1Q92959 643 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 NCLNQ969V3 563 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 ZNF669Q96BR6 464 aaPredicted RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 ALKBH8Q96BT7 664 aaKnown RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 PYCR2Q96C36 320 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 MBD6Q96DN6 1003 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 PDLIM2Q96JY6 352 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 PWWP2AQ96N64 755 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 SMC6Q96SB8 1091 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 AARSD1Q9BTE6 412 aaKnown RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 KLHL31Q9H511 634 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 LIN28AQ9H9Z2 209 aaKnown RBP14.26□□□□□ -0.13
MCF2L-228ENST00000487354 TIMMDC1Q9NPL8 285 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 CRIM1Q9NZV1 1036 aa14.26□□□□□ -0.13
MCF2L-228ENST00000487354 CTAGE9A4FU28 777 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 OR14I1A6ND48 311 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 G3V3Y1 287 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 ZNF354AO60765 605 aaPredicted RBP14.25□□□□□ -0.13
MCF2L-228ENST00000487354 OR2J2O76002 312 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 HAUS5O94927 633 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 RNH1P13489 461 aaKnown RBP14.25□□□□□ -0.13
MCF2L-228ENST00000487354 ENDOUP21128 410 aaKnown RBP14.25□□□□□ -0.13
MCF2L-228ENST00000487354 CCND1P24385 295 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 GRK3P35626 688 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 KCNJ1P48048 391 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 SSR4P51571 173 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 CCR8P51685 355 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 HNRNPFP52597 415 aaKnown RBP14.25□□□□□ -0.13
MCF2L-228ENST00000487354 RAB8AP61006 207 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 CDK16Q00536 496 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 LTBQ06643 244 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 SP140Q13342 867 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 ARMC3Q5W041 872 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 B3GNT6Q6ZMB0 384 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 TRILQ7L0X0 811 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 CDC20BQ86Y33 519 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 TMEM251Q8N6I4 163 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 WFDC11Q8NEX6 87 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 OR56A3Q8NH54 315 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 VMP1Q96GC9 406 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 PARVBQ9HBI1 364 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 ZFP69BQ9UJL9 534 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 FBXW2Q9UKT8 454 aa14.25□□□□□ -0.13
MCF2L-228ENST00000487354 BCKDKO14874 412 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 C8GP07360 202 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 PAMP19021 973 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 SOX3P41225 446 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 MAGEA5P43359 124 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 TERF1P54274 439 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 REEP5Q00765 189 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 FOXO1Q12778 655 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 ZNF585AQ6P3V2 769 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 PAMR1Q6UXH9 720 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 C4orf22Q6V702 233 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 SEM1Q6ZVN7 128 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 ABHD13Q7L211 337 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 RELL2Q8NC24 303 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-228ENST00000487354 OR10Q1Q8NGQ4 319 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 CREB3L4Q8TEY5 395 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 NEIL2Q969S2 332 aa14.24□□□□□ -0.13
MCF2L-228ENST00000487354 RMND5BQ96G75 393 aaPredicted RBP14.24□□□□□ -0.13
MCF2L-228ENST00000487354 SNF8Q96H20 258 aa14.24□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms