RNA–Protein interactions for RNA: ENST00000487029.1

SNRNP27-204, Transcript of small nuclear ribonucleoprotein U4/U6.U5 subunit 27, humanhuman

TSL 3

Gene SNRNP27, Length 604 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP27-204ENST00000487029 LRRC37A5PQ49AS3 106 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 FAM106AQ4KMX7 169 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 C17orf107Q6ZR85 190 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 CHMP1BQ7LBR1 199 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 CNTN4Q8IWV2 1026 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 SFRP1Q8N474 314 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 WDSUB1Q8N9V3 476 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 GGHQ92820 318 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 ULK4Q96C45 1275 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 PCDHB18PQ96TA0 734 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 KRT12Q99456 494 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 ASCL2Q99929 193 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 LRRC2Q9BYS8 371 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 BARHL1Q9BZE3 327 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 HOXD1Q9GZZ0 328 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 MAGEF1Q9HAY2 307 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 TMEM181Q9P2C4 612 aa3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 DBF4Q9UBU7 674 aaPredicted RBP3.04□□□□□ -1.92
SNRNP27-204ENST00000487029 MYH14Q7Z406 1995 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 RNF123Q5XPI4 1314 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 hCG_38984A0A1B0GV85 526 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 TMEM129A0AVI4 362 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 GTPBP10A4D1E9 387 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 RTCAO00442 366 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 MAGEB2O15479 319 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CEACAM4O75871 244 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CLDN1O95832 211 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 GAS8O95995 478 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 IGHEP01854 428 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 THEGLP0DJG4 465 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 ATP6V1E1P36543 226 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 OPRL1P41146 370 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 SLC6A12P48065 614 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 UCP2P55851 309 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 IRX4P78413 519 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CBX3Q13185 183 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 GPR50Q13585 617 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CEACAM7Q14002 265 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CDC37Q16543 378 aaPredicted RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 WLSQ5T9L3 541 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 BSPRYQ5W0U4 402 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF776Q68DI1 518 aaPredicted RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF772Q68DY9 489 aaPredicted RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 ALKBH5Q6P6C2 394 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CD164L2Q6UWJ8 174 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 LAX1Q8IWV1 398 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 THEM5Q8N1Q8 247 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 ADAD2Q8NCV1 583 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 OR13C5Q8NGS8 318 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 RNASE8Q8TDE3 154 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 HCAR2Q8TDS4 363 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 FAM46BQ96A09 425 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 BPIFA2Q96DR5 249 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 EEF2KMTQ96G04 330 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 FAM218AQ96MZ4 157 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 ZNF300Q96RE9 604 aaPredicted RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 GAL3ST4Q96RP7 486 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 USP28Q96RU2 1077 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 DDX50Q9BQ39 737 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 UBAC1Q9BSL1 405 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 DGCR6LQ9BY27 220 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 TSPYL1Q9H0U9 437 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 MTIF3Q9H2K0 278 aaKnown RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 ZDHHC6Q9H6R6 413 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 MTHFD2LQ9H903 347 aaPredicted RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 VIPAS39Q9H9C1 493 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 KLHL8Q9P2G9 620 aaPredicted RBP3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CACNG5Q9UF02 275 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 LNPEPQ9UIQ6 1025 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 EXOC6BQ9Y2D4 811 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 CSNK1G3Q9Y6M4 447 aa3.03□□□□□ -1.92
SNRNP27-204ENST00000487029 NEDD4P46934 1319 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CHUKO15111 745 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SYT7O43581 403 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 ZFAND5O76080 213 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 MT-ND3P03897 115 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 P4HA1P13674 534 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 MYOGP15173 224 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 STMN1P16949 149 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 C4BPBP20851 252 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 GIFP27352 417 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 MMP12P39900 470 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 NT5C2P49902 561 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SMSP52788 366 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CYCSP99999 105 aaKnown RBP3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CNTN1Q12860 1018 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 TMEM187Q14656 261 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 MTF1Q14872 753 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 HFEQ30201 348 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SPANXN4Q5MJ08 99 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 PLPP4Q5VZY2 271 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 Q6ZRP5 223 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 RFPL4BQ6ZWI9 263 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 ZER1Q7Z7L7 766 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 CATSPERDQ86XM0 798 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SERPINA12Q8IW75 414 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 PEX5LQ8IYB4 626 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SLC22A15Q8IZD6 547 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 ELMOD1Q8N336 334 aa3.02□□□□□ -1.93
SNRNP27-204ENST00000487029 SLC43A2Q8N370 569 aa3.02□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms