RNA–Protein interactions for RNA: ENST00000486404.5

CHMP3-208, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 650 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-208ENST00000486404 UBE2E3Q969T4 207 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 SNRNP40Q96DI7 357 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 PTCHD1Q96NR3 888 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 ATOH8Q96SQ7 321 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 REXO4Q9GZR2 422 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 KLHL31Q9H511 634 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 NT5DC2Q9H857 520 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 KCNK13Q9HB14 408 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 ASF1BQ9NVP2 202 aa12.13□□□□□ -0.47
CHMP3-208ENST00000486404 CPSF2Q9P2I0 782 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 MRPS33Q9Y291 106 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 SETXQ7Z333 2677 aaKnown RBP12.13□□□□□ -0.47
CHMP3-208ENST00000486404 TRAV17A0A0B4J275 112 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 EXOC1LA0A1B0GW35 172 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 A8MUI8 341 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 C4orf51C9J302 202 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 POC1B-GALNT4F8VUJ3 575 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 AGFG2O95081 481 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 KLHL2O95198 593 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 F10P00742 488 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 ALDOAP04075 364 aaKnown RBP12.12□□□□□ -0.47
CHMP3-208ENST00000486404 EPB42P16452 691 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 SERPINB1P30740 379 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 ARL1P40616 181 aaPredicted RBP12.12□□□□□ -0.47
CHMP3-208ENST00000486404 PLA2G16P53816 162 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 UBAP2LQ14157 1087 aaKnown RBP12.12□□□□□ -0.47
CHMP3-208ENST00000486404 RCN2Q14257 317 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 ACAP2Q15057 778 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 NR6A1Q15406 480 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 TBCCQ15814 346 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 PFKFB4Q16877 469 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 UBAP2Q5T6F2 1119 aaKnown RBP12.12□□□□□ -0.47
CHMP3-208ENST00000486404 FHL5Q5TD97 284 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 IFT20Q8IY31 132 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 SHISA5Q8N114 240 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 CA13Q8N1Q1 262 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 PLPP5Q8NEB5 264 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 OR2L5Q8NG80 312 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 UHMK1Q8TAS1 419 aaKnown RBP12.12□□□□□ -0.47
CHMP3-208ENST00000486404 SLC44A1Q8WWI5 657 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 MS4A6EQ96DS6 147 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 C19orf60Q96EN9 201 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 WDR34Q96EX3 536 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 SCYL1Q96KG9 808 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 IMMP1LQ96LU5 166 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 PRDM9Q9NQV7 894 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 PLA2G3Q9NZ20 509 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 COPG2Q9UBF2 871 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 ASB1Q9Y576 335 aa12.12□□□□□ -0.47
CHMP3-208ENST00000486404 LRIT2A6NDA9 550 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 TCP11X1B4DZS4 312 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 MYBL2P10244 700 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 MAOAP21397 527 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 CNTFP26441 200 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 CERS1P27544 350 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 ECHS1P30084 290 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 KCNC1P48547 511 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 PIK3CGP48736 1102 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 TNFSF10P50591 281 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 ALDH18A1P54886 795 aaKnown RBP12.11□□□□□ -0.47
CHMP3-208ENST00000486404 MTTPP55157 894 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 RAB38P57729 211 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 PHEXP78562 749 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 MRPL49Q13405 166 aaKnown RBP12.11□□□□□ -0.47
CHMP3-208ENST00000486404 DDX39BQ13838 428 aaKnown RBP12.11□□□□□ -0.47
CHMP3-208ENST00000486404 SETDB1Q15047 1291 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 ADNP2Q6IQ32 1131 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 MED27Q6P2C8 311 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 SLC5A8Q8N695 610 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 TEX9Q8N6V9 391 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 FAM47BQ8NA70 645 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 OR1N1Q8NGS0 311 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 M1APQ8TC57 530 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 PSMF1Q92530 271 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 ZNF354BQ96LW1 612 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 KCNC2Q96PR1 638 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 CENPKQ9BS16 269 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 NPLQ9BXD5 320 aaPredicted RBP12.11□□□□□ -0.47
CHMP3-208ENST00000486404 FUT8Q9BYC5 575 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 ROGDIQ9GZN7 287 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 RNF32Q9H0A6 362 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 ACTR8Q9H981 624 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 MMP25Q9NPA2 562 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 NFU1Q9UMS0 254 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 MMACHCQ9Y4U1 282 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 SPACA6W5XKT8 324 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 HECTD1Q9ULT8 2610 aa12.11□□□□□ -0.47
CHMP3-208ENST00000486404 SVILO95425 2214 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 HMX2A2RU54 273 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 OR5H15A6NDH6 313 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 ANKUB1A6NFN9 424 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SAGE2PA6NJ88 616 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 CLDN4O14493 209 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 DNAJB6O75190 326 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SMIM24O75264 130 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 WDPCPO95876 746 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 RHOXF2BP0C7M4 288 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SMIM10L1P0DMW3 83 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 CD22P20273 847 aa12.1□□□□□ -0.47
CHMP3-208ENST00000486404 SSR2P43308 183 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms