RNA–Protein interactions for RNA: ENST00000486227.5

HDAC6-228, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 4,718 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-228ENST00000486227 PTPRZ1P23471 2315 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 A0A1W2PQU0 124 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 FAM172BPA6NC97 362 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PPP6CO00743 305 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF217O75362 1048 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CEBPBP17676 345 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 GSTM2P28161 218 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 MAGEA3P43357 314 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PTPRRQ15256 657 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 MPP7Q5T2T1 576 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 LIPJQ5W064 366 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CADM2Q8N3J6 435 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PGBD5Q8N414 524 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 OXR1Q8N573 874 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CAMKVQ8NCB2 501 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 LRRC20Q8TCA0 184 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 WDR92Q96MX6 357 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 NDC1Q9BTX1 674 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 OCEL1Q9H607 264 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF576Q9H609 170 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 FBRSQ9HAH7 460 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 TMEM27Q9HBJ8 222 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PTGFRNQ9P2B2 879 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF222Q9UK12 451 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 HCFC2Q9Y5Z7 792 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 HIDE1A8MVS5 230 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 SLC16A5O15375 505 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 C6orf47O95873 294 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 DHFRP00374 187 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 HPRP00739 348 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 SRP54P61011 504 aaKnown RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CDK6Q00534 326 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF45Q02386 682 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 LCN1P1Q5VSP4 162 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF517Q6ZMY9 492 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZSCAN2Q7Z7L9 614 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CACTIN-AS1Q8N1I8 211 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 FBXO15Q8NCQ5 510 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 OR8H1Q8NGG4 311 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 SHKBP1Q8TBC3 707 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 TRIB3Q96RU7 358 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 OR2B2Q9GZK3 357 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 SOX17Q9H6I2 414 aaPredicted RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CPNE5Q9HCH3 593 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CALML5Q9NZT1 146 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 OAS3Q9Y6K5 1087 aaKnown RBP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 A8MU76 341 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 NPPAP01160 153 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 SMIM18P0DKX4 95 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 C1GALT1C1LP0DN25 315 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CRISP3P54108 245 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 FOXA1P55317 472 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 VBP1P61758 197 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 BTN3A2P78410 334 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 SLC7A9P82251 487 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF763Q0D2J5 394 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 GK3PQ14409 553 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 PCBP2Q15366 365 aaKnown RBP eCLIP10.62□□□□□ -0.71
HDAC6-228ENST00000486227 ZNF181Q2M3W8 571 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 LCN8Q6JVE9 175 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 POMZP3Q6PJE2 187 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 BLOC1S3Q6QNY0 202 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 IGFN1Q86VF2 1251 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CNTN4Q8IWV2 1026 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 GPR65Q8IYL9 337 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 CPXM2Q8N436 756 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 MINDY1Q8N5J2 469 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 SLC22A4Q9H015 551 aa10.62□□□□□ -0.71
HDAC6-228ENST00000486227 JMJD7P0C870 316 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 ARSAP15289 507 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 DRD1P21728 446 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 HLA-FP30511 346 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 KHKP50053 298 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 PSMD4P55036 377 aaKnown RBP10.61□□□□□ -0.71
HDAC6-228ENST00000486227 GABARAPL2P60520 117 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 MBTPS1Q14703 1052 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 ZSWIM7Q19AV6 140 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 OR2T5Q6IEZ7 315 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 RSPO2Q6UXX9 243 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-228ENST00000486227 ZFAND4Q86XD8 727 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 COX18Q8N8Q8 333 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 MFSD2AQ8NA29 543 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 OR2T29Q8NH02 315 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 GPR151Q8TDV0 419 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 MZB1Q8WU39 189 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 C5orf34Q96MH7 638 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 FUNDC2Q9BWH2 189 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 C20orf27Q9GZN8 174 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 UTS2RQ9UKP6 389 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 ACSL5Q9ULC5 683 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 PCDHGA7Q9Y5G6 932 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 ADAMTSL1Q8N6G6 1762 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 GLOD5A6NK44 160 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 MCIDASD6RGH6 385 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 H0YC42 278 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 RNGTTO60942 597 aaKnown RBP10.61□□□□□ -0.71
HDAC6-228ENST00000486227 PRKACGP22612 351 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 TBPL1P62380 186 aa10.61□□□□□ -0.71
HDAC6-228ENST00000486227 GALNT1Q10472 559 aaPredicted RBP10.61□□□□□ -0.71
HDAC6-228ENST00000486227 CEACAM20Q6UY09 585 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms