RNA–Protein interactions for RNA: ENST00000486204.5

SSR4-211, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 3

Gene SSR4, Length 658 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-211ENST00000486204 ZNF888P0CJ79 500 aaPredicted RBP12.21□□□□□ -0.45
SSR4-211ENST00000486204 PIM1P11309 404 aaPredicted RBP12.21□□□□□ -0.45
SSR4-211ENST00000486204 ALOX12P18054 663 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 IMPDH1P20839 514 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 HNF4AP41235 474 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 EFNA3P52797 238 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 PRKAA2P54646 552 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 CDH13P55290 713 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 RGS1Q08116 209 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 MRPL49Q13405 166 aaKnown RBP12.21□□□□□ -0.45
SSR4-211ENST00000486204 ERV3-1Q14264 604 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 CCDC153Q494R4 210 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 TOR1AIP1Q5JTV8 583 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 LIPJQ5W064 366 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 FAM219BQ5XKK7 198 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 MED27Q6P2C8 311 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 LRIG3Q6UXM1 1119 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 SLC34A3Q8N130 599 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 STT3BQ8TCJ2 826 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 ZNF473Q8WTR7 871 aaKnown RBP12.21□□□□□ -0.45
SSR4-211ENST00000486204 MS4A6EQ96DS6 147 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 MS4A8Q9BY19 250 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 ACTR8Q9H981 624 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 SEMA4BQ9NPR2 832 aaPredicted RBP12.21□□□□□ -0.45
SSR4-211ENST00000486204 GPN3Q9UHW5 284 aaPredicted RBP12.21□□□□□ -0.45
SSR4-211ENST00000486204 ZNF225Q9UK10 706 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 RNF11Q9Y3C5 154 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 PTRH2Q9Y3E5 179 aaKnown RBP12.21□□□□□ -0.45
SSR4-211ENST00000486204 NAALAD2Q9Y3Q0 740 aa12.21□□□□□ -0.45
SSR4-211ENST00000486204 LRIT2A6NDA9 550 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 ZNF860A6NHJ4 632 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 ANKDD1BA6NHY2 528 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 H0YIV9 168 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 SGK494L7N484 410 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 PRPF4O43172 522 aaKnown RBP eCLIP12.2□□□□□ -0.46
SSR4-211ENST00000486204 TYROBPO43914 113 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 DNAJB6O75190 326 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 RDH16O75452 317 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 CD63P08962 238 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 TSPAN8P19075 237 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 FOLR3P41439 243 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 AVPR1BP47901 424 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 RAB8AP61006 207 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 MAT1AQ00266 395 aaKnown RBP12.2□□□□□ -0.46
SSR4-211ENST00000486204 CLCQ05315 142 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 PCLAFQ15004 111 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 GGTA1PQ4G0N0 100 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 DEFB134Q4QY38 66 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 VWA2Q5GFL6 755 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 CEP85LQ5SZL2 805 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 SLC22A9Q8IVM8 553 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 ZC3H7AQ8IWR0 971 aaKnown RBP12.2□□□□□ -0.46
SSR4-211ENST00000486204 RNF175Q8N4F7 328 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 OR4F6Q8NGB9 312 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 OR5T3Q8NGG3 340 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 WDR20Q8TBZ3 569 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 RDH11Q8TC12 318 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 UBE2E3Q969T4 207 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 GAL3ST3Q96A11 431 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 TGIF2Q9GZN2 237 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 GSTO2Q9H4Y5 243 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 ANKHQ9HCJ1 492 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 SLC17A7Q9P2U7 560 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 ZNF282Q9UDV7 671 aaPredicted RBP12.2□□□□□ -0.46
SSR4-211ENST00000486204 NXT1Q9UKK6 140 aaKnown RBP12.2□□□□□ -0.46
SSR4-211ENST00000486204 PLLPQ9Y342 182 aa12.2□□□□□ -0.46
SSR4-211ENST00000486204 CDC14CA4D256 554 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 RGS16O15492 202 aaPredicted RBP12.19□□□□□ -0.46
SSR4-211ENST00000486204 SPAG7O75391 227 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 SUPT7LO94864 414 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 CLDN9O95484 217 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 ZGLP1P0C6A0 271 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 MYL2P10916 166 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 H2AFXP16104 143 aaPredicted RBP12.19□□□□□ -0.46
SSR4-211ENST00000486204 SERPINB1P30740 379 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 CCNG1P51959 295 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 STXBP1P61764 594 aaKnown RBP12.19□□□□□ -0.46
SSR4-211ENST00000486204 KLC1Q07866 573 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 HERC3Q15034 1050 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 CPSF6Q16630 551 aaKnown RBP eCLIP12.19□□□□□ -0.46
SSR4-211ENST00000486204 HIST2H2ACQ16777 129 aaPredicted RBP12.19□□□□□ -0.46
SSR4-211ENST00000486204 NADK2Q4G0N4 442 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 HIST2H2AA3Q6FI13 130 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 LETMD1Q6P1Q0 360 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 SHISA6Q6ZSJ9 500 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 ABHD13Q7L211 337 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 PPP1R32Q7Z5V6 425 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 UBE3DQ7Z6J8 389 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 EXOC3L1Q86VI1 746 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 LAPTM4BQ86VI4 370 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 MYLK4Q86YV6 388 aaPredicted RBP12.19□□□□□ -0.46
SSR4-211ENST00000486204 MYRIPQ8NFW9 859 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 OR2L5Q8NG80 312 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 HUS1BQ8NHY5 278 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 TCP10LQ8TDR4 215 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 ZBTB9Q96C00 473 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 CCDC126Q96EE4 140 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 PGM2Q96G03 612 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 QRFPRQ96P65 431 aa12.19□□□□□ -0.46
SSR4-211ENST00000486204 SOX17Q9H6I2 414 aaPredicted RBP12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms