RNA–Protein interactions for RNA: ENST00000486037.1

SND1-213, Transcript of staphylococcal nuclease and tudor domain containing 1, humanhuman

TSL 3

Gene SND1, Length 695 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SND1-213ENST00000486037 SUN3Q8TAQ9 357 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 STT3BQ8TCJ2 826 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 ANKRD49Q8WVL7 239 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 FAM136AQ96C01 138 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 NXNL1Q96CM4 212 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 RMND5BQ96G75 393 aaPredicted RBP9.27□□□□□ -0.93
SND1-213ENST00000486037 GPR78Q96P69 363 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 COPS8Q99627 209 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 GPR21Q99679 349 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 SLC30A3Q99726 388 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 CAPS2Q9BXY5 557 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 CHRNA10Q9GZZ6 450 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 OR52A5Q9H2C5 316 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 CCDC68Q9H2F9 335 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 CLEC4MQ9H2X3 399 aaPredicted RBP9.27□□□□□ -0.93
SND1-213ENST00000486037 POPDC3Q9HBV1 291 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 CUTCQ9NTM9 273 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 ANKRD10Q9NXR5 420 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 STOX2Q9P2F5 926 aaPredicted RBP9.27□□□□□ -0.93
SND1-213ENST00000486037 C3orf18Q9UK00 162 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 PLCL2Q9UPR0 1127 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 ACOT9Q9Y305 439 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 COMMD10Q9Y6G5 202 aa9.27□□□□□ -0.93
SND1-213ENST00000486037 HIVEP2P31629 2446 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 A0A0J9YY10 115 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 WIPF1O43516 503 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 MAN1A2O60476 641 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 PLIN3O60664 434 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 SHOX2O60902 331 aaPredicted RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 WFS1O76024 890 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 KLHL2O95198 593 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 ATE1O95260 518 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 ZGLP1P0C6A0 271 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 COL6A2P12110 1019 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 CD9P21926 228 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 CHRNB4P30926 498 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 AKT1P31749 480 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 PPARGP37231 505 aaPredicted RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 SERPINB4P48594 390 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 NR0B1P51843 470 aaKnown RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 YBX1P67809 324 aaKnown RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 ZNF33BQ06732 778 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 DEFB113Q30KQ7 82 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 ZNF658BQ4V348 819 aaPredicted RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 PAQR3Q6TCH7 311 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 PAMR1Q6UXH9 720 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 BEST3Q8N1M1 668 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 GHDCQ8N2G8 530 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 SPATA6LQ8N4H0 392 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 TMEM151AQ8N4L1 468 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 HEXDCQ8WVB3 486 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 CKAP2Q8WWK9 683 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 DLG3Q92796 817 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 UBXN10Q96LJ8 280 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 TTC1Q99614 292 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 PAIP2Q9BPZ3 127 aaKnown RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 ZCCHC2Q9C0B9 1178 aaKnown RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 IQCGQ9H095 443 aaKnown RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 CCDC134Q9H6E4 229 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 ZNF395Q9H8N7 513 aaPredicted RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 KCNJ16Q9NPI9 418 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 RASSF1Q9NS23 344 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 STMN3Q9NZ72 180 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 GNPTGQ9UJJ9 305 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 NXT1Q9UKK6 140 aaKnown RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 RUVBL2Q9Y230 463 aaKnown RBP9.26□□□□□ -0.93
SND1-213ENST00000486037 HEBP2Q9Y5Z4 205 aa9.26□□□□□ -0.93
SND1-213ENST00000486037 A0A1W2PQ72 361 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 WDR91A4D1P6 747 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 PRRG2O14669 202 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 VPS26AO75436 327 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 CHRM5P08912 532 aaPredicted RBP9.25□□□□□ -0.93
SND1-213ENST00000486037 SBK3P0C264 359 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 CCDC166P0CW27 439 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 ZNF37AP17032 561 aaPredicted RBP9.25□□□□□ -0.93
SND1-213ENST00000486037 CHRM3P20309 590 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 MSH3P20585 1137 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 MAGP20916 626 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 LSP1P33241 339 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 GRIA3P42263 894 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 RAB28P51157 221 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 CLCN7P51798 805 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 TUBA3CQ13748 450 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 BOP1Q14137 746 aaKnown RBP9.25□□□□□ -0.93
SND1-213ENST00000486037 CSHL1Q14406 222 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 BCL7AQ4VC05 210 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 ABHD17BQ5VST6 288 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 PTRHD1Q6GMV3 140 aaKnown RBP9.25□□□□□ -0.93
SND1-213ENST00000486037 SPINK14Q6IE38 97 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 LRRC8EQ6NSJ5 796 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 TUBA3EQ6PEY2 450 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 CCDC91Q7Z6B0 441 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.25□□□□□ -0.93
SND1-213ENST00000486037 TBC1D1Q86TI0 1168 aaPredicted RBP9.25□□□□□ -0.93
SND1-213ENST00000486037 LCA5Q86VQ0 697 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 MCATQ8IVS2 390 aaKnown RBP9.25□□□□□ -0.93
SND1-213ENST00000486037 OR5AR1Q8NGP9 310 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 CD200R1Q8TD46 325 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 DYDC1Q8WWB3 177 aa9.25□□□□□ -0.93
SND1-213ENST00000486037 ASB5Q8WWX0 329 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms