RNA–Protein interactions for RNA: ENST00000486023.1

COL6A1-204, Transcript of collagen type VI alpha 1 chain, humanhuman

TSL 2

Gene COL6A1, Length 968 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A1-204ENST00000486023 ANKRD10Q9NXR5 420 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 CPSF2Q9P2I0 782 aaKnown RBP16.6■□□□□ 0.25
COL6A1-204ENST00000486023 OPTCQ9UBM4 332 aa16.6■□□□□ 0.25
COL6A1-204ENST00000486023 SYCE1LA8MT33 242 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 B3GALT2O43825 422 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 TUBB4AP04350 444 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 CD22P20273 847 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 SERPINB8P50452 374 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 RUNX2Q13950 521 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 GLE1Q53GS7 698 aaKnown RBP16.59■□□□□ 0.25
COL6A1-204ENST00000486023 PAGE2BQ5JRK9 111 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 KLC3Q6P597 504 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 TRIM40Q6P9F5 258 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 LRRC70Q7Z2Q7 622 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 VN1R5Q7Z5H4 357 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 CENPLQ8N0S6 344 aaPredicted RBP16.59■□□□□ 0.25
COL6A1-204ENST00000486023 SUN3Q8TAQ9 357 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 EFCAB11Q9BUY7 163 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 TSPYL1Q9H0U9 437 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 ACSS3Q9H6R3 686 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 NT5DC2Q9H857 520 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 COPS7BQ9H9Q2 264 aaPredicted RBP16.59■□□□□ 0.25
COL6A1-204ENST00000486023 NFU1Q9UMS0 254 aa16.59■□□□□ 0.25
COL6A1-204ENST00000486023 MYOCOSA0A1B0GUC4 107 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 BLACEA4D250 179 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 ANKUB1A6NFN9 424 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 LRRC14BA6NHZ5 514 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 K7EPI3 171 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 SEMA7AO75326 666 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 CLEC3AO75596 197 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 KLHL2O95198 593 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 CBX6O95503 412 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 CYC1P08574 325 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 RHOXF2BP0C7M4 288 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 EPORP19235 508 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 TSFMP43897 325 aaKnown RBP16.58■□□□□ 0.24
COL6A1-204ENST00000486023 TNFSF10P50591 281 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 LAPTM5Q13571 262 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 DDX39BQ13838 428 aaKnown RBP16.58■□□□□ 0.24
COL6A1-204ENST00000486023 EXT1Q16394 746 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 FAM180AQ6UWF9 173 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 CEP112Q8N8E3 955 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 FAM47BQ8NA70 645 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 ARMC2Q8NEN0 867 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 M1APQ8TC57 530 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 HAS2Q92819 552 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 SCYL1Q96KG9 808 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 ZNF354BQ96LW1 612 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 RHOXF2Q9BQY4 288 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 NECTIN3Q9NQS3 549 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 PRDM9Q9NQV7 894 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 PNO1Q9NRX1 252 aaKnown RBP16.58■□□□□ 0.24
COL6A1-204ENST00000486023 ZNF358Q9NW07 568 aa16.58■□□□□ 0.24
COL6A1-204ENST00000486023 A0A088AWK7 358 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 TRAV17A0A0B4J275 112 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 SAP18O00422 153 aaKnown RBP16.57■□□□□ 0.24
COL6A1-204ENST00000486023 TGFB1P01137 390 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 ALDOAP04075 364 aaKnown RBP16.57■□□□□ 0.24
COL6A1-204ENST00000486023 EPB42P16452 691 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 ZNF10P21506 573 aaPredicted RBP16.57■□□□□ 0.24
COL6A1-204ENST00000486023 CERS1P27544 350 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 ARL1P40616 181 aaPredicted RBP16.57■□□□□ 0.24
COL6A1-204ENST00000486023 SLC26A5P58743 744 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 SLC13A2Q13183 592 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 ACAP2Q15057 778 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 ACER2Q5QJU3 275 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 MED27Q6P2C8 311 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 CLNKQ7Z7G1 428 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 CRLF3Q8IUI8 442 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 BEST3Q8N1M1 668 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 PLD6Q8N2A8 252 aaKnown RBP16.57■□□□□ 0.24
COL6A1-204ENST00000486023 KIF2BQ8N4N8 673 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 OR2L5Q8NG80 312 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 SLC44A1Q8WWI5 657 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 PAFAH2Q99487 392 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 EHD1Q9H4M9 534 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 CDCP1Q9H5V8 836 aa16.57■□□□□ 0.24
COL6A1-204ENST00000486023 LRRK2Q5S007 2527 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 DOCK10Q96BY6 2186 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 OR5H15A6NDH6 313 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 RTCAO00442 366 aaKnown RBP16.56■□□□□ 0.24
COL6A1-204ENST00000486023 MAN1A2O60476 641 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 TBX6O95947 436 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-204ENST00000486023 MTHFD2P13995 350 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 GSTM2P28161 218 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 ECHS1P30084 290 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 HPDP32754 393 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-204ENST00000486023 TAS2R50P59544 299 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 OC90Q02509 493 aaPredicted RBP16.56■□□□□ 0.24
COL6A1-204ENST00000486023 TGM3Q08188 693 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 MEP1AQ16819 746 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 ABHD17CQ6PCB6 329 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 QSOX2Q6ZRP7 698 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 TAOK1Q7L7X3 1001 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 CCDC91Q7Z6B0 441 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 RELL1Q8IUW5 271 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 IFT20Q8IY31 132 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 RNF175Q8N4F7 328 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 RHEBL1Q8TAI7 183 aa16.56■□□□□ 0.24
COL6A1-204ENST00000486023 SREK1Q8WXA9 508 aaKnown RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms