RNA–Protein interactions for RNA: ENST00000485746.1

PTCD1-205, Transcript of pentatricopeptide repeat domain 1, humanhuman

TSL 3

Gene PTCD1, Length 721 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD1-205ENST00000485746 RIPOR1Q6ZS17 1223 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SHISA5Q8N114 240 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 CA13Q8N1Q1 262 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SIRT6Q8N6T7 355 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 RBMXL3Q8N7X1 1067 aaKnown RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 DNAJB14Q8TBM8 379 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 BRIX1Q8TDN6 353 aaKnown RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 PPP4R1Q8TF05 950 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 CMTM7Q96FZ5 175 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SMIM10Q96HG1 83 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SERINC2Q96SA4 455 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 NPLQ9BXD5 320 aaPredicted RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 TXLNGYQ9BZA5 131 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 ROGDIQ9GZN7 287 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 NOL11Q9H8H0 719 aaKnown RBP11.79□□□□□ -0.52
PTCD1-205ENST00000485746 LANCL2Q9NS86 450 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 COPG2Q9UBF2 871 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 PCDHGA11Q9Y5H2 935 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 SPACA6W5XKT8 324 aa11.79□□□□□ -0.52
PTCD1-205ENST00000485746 ATMQ13315 3056 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 A8MUA0 341 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 A8MUI8 341 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 MAGEB17A8MXT2 336 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 STX16-NPEPL1H3BU86 382 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 GOLGA8RI6L899 631 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 CLDN4O14493 209 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 STX16O14662 325 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 KLK8O60259 260 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 WISP1O95388 367 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 CLDN9O95484 217 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 PYGBP11216 843 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 KRT15P19012 456 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 GCAP28676 217 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 TNFRSF8P28908 595 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 SLCO1A2P46721 670 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 ARG2P78540 354 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 RHAGQ02094 409 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 IGFBP7Q16270 282 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 EXT1Q16394 746 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 CPSF6Q16630 551 aaKnown RBP eCLIP11.78□□□□□ -0.52
PTCD1-205ENST00000485746 TMEM35AQ53FP2 167 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 CRB2Q5IJ48 1285 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 SLC6A19Q695T7 634 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 ADNP2Q6IQ32 1131 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 METTL2BQ6P1Q9 378 aaKnown RBP11.78□□□□□ -0.52
PTCD1-205ENST00000485746 ABHD17CQ6PCB6 329 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 PAPD4Q6PIY7 484 aaKnown RBP11.78□□□□□ -0.52
PTCD1-205ENST00000485746 VN1R5Q7Z5H4 357 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 LAS2Q8IYD9 372 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 OR7G3Q8NG95 312 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 ACMSDQ8TDX5 336 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 ADAMTS18Q8TE60 1221 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 ZNF473Q8WTR7 871 aaKnown RBP11.78□□□□□ -0.52
PTCD1-205ENST00000485746 TSLPQ969D9 159 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 PNPLA2Q96AD5 504 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 MTFMTQ96DP5 389 aaKnown RBP11.78□□□□□ -0.52
PTCD1-205ENST00000485746 KCNC2Q96PR1 638 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 LMF1Q96S06 567 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 LPAR4Q99677 370 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 KCNK13Q9HB14 408 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 PRDM9Q9NQV7 894 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 FETUBQ9UGM5 382 aa11.78□□□□□ -0.52
PTCD1-205ENST00000485746 MRPS33Q9Y291 106 aaKnown RBP11.78□□□□□ -0.52
PTCD1-205ENST00000485746 DYTNA2CJ06 578 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 ESPNB1AK53 854 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 C4orf51C9J302 202 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 SAP18O00422 153 aaKnown RBP11.77□□□□□ -0.53
PTCD1-205ENST00000485746 UGDHO60701 494 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 SHBGP04278 402 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 CELA2AP08217 269 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 ITGAMP11215 1152 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 CERS1P27544 350 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 PIK3CBP42338 1070 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 SSR2P43308 183 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 RAB38P57729 211 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 BTG2P78543 158 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 SLC13A2Q13183 592 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 MFAP5Q13361 173 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 RUNX2Q13950 521 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 ABHD17BQ5VST6 288 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 QSOX2Q6ZRP7 698 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 MILR1Q7Z6M3 343 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 LCA5Q86VQ0 697 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 ATCAYQ86WG3 371 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 FAM47BQ8NA70 645 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 HUS1BQ8NHY5 278 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 CPT1CQ8TCG5 803 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 RGMAQ96B86 450 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 MTERF1Q99551 399 aaKnown RBP11.77□□□□□ -0.53
PTCD1-205ENST00000485746 WDR77Q9BQA1 342 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-205ENST00000485746 TBCDQ9BTW9 1192 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 MS4A8Q9BY19 250 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 AICDAQ9GZX7 198 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 OR51B5Q9H339 312 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 ANKZF1Q9H8Y5 726 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 PPCSQ9HAB8 311 aa11.77□□□□□ -0.53
PTCD1-205ENST00000485746 ZBTB20Q9HC78 741 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-205ENST00000485746 SEMA4BQ9NPR2 832 aaPredicted RBP11.77□□□□□ -0.53
PTCD1-205ENST00000485746 PRTFDC1Q9NRG1 225 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms