RNA–Protein interactions for RNA: ENST00000485275.2

LRIF1-202, Transcript of ligand dependent nuclear receptor interacting factor 1, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LRIF1, Length 1,796 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRIF1-202ENST00000485275 FAM234BA2RU67 622 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 PRKRAO75569 313 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 SCELO95171 688 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 SNRPB2P08579 225 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 IL3P08700 152 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 ANKRD34CP0C6C1 535 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 ESRRAP11474 423 aaPredicted RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 IL1RNP18510 177 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 CPOXP36551 454 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 POLR2JP52435 117 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 HNRNPH2P55795 449 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 TAS2R50P59544 299 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 STXBP1P61764 594 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 IRX1P78414 480 aaPredicted RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 CYLC2Q14093 348 aaPredicted RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 FAM174BQ3ZCQ3 159 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 DEFB134Q4QY38 66 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 ZNF385BQ569K4 471 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 ZC3H12BQ5HYM0 836 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 CCNYL2Q5T2Q4 361 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 MRM1Q6IN84 353 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 TRIM40Q6P9F5 258 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 ACOT4Q8N9L9 421 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 OR7A2PQ8NGA2 310 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 RP9Q8TA86 221 aaKnown RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 SPRTNQ9H040 489 aaPredicted RBP13.81□□□□□ -0.2
LRIF1-202ENST00000485275 KCNH6Q9H252 994 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 MYNNQ9NPC7 610 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 TOR4AQ9NXH8 423 aa13.81□□□□□ -0.2
LRIF1-202ENST00000485275 ZNF860A6NHJ4 632 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 SCAMP2O15127 329 aaKnown RBP13.8□□□□□ -0.2
LRIF1-202ENST00000485275 MYO1DO94832 1006 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 GP1BAP07359 652 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 PIM1P11309 404 aaPredicted RBP13.8□□□□□ -0.2
LRIF1-202ENST00000485275 CLDN6P56747 220 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 C21orf58P58505 322 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 PAGE3Q5JUK9 113 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 PRAMEF17Q5VTA0 474 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 REP15Q6BDI9 236 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 FAM71E1Q6IPT2 247 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 PARP9Q8IXQ6 854 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 RBM15BQ8NDT2 890 aaKnown RBP13.8□□□□□ -0.2
LRIF1-202ENST00000485275 OR1L3Q8NH93 324 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 TM4SF18Q96CE8 201 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 CMTM5Q96DZ9 223 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 SPDL1Q96EA4 605 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 GFM1Q96RP9 751 aaKnown RBP13.8□□□□□ -0.2
LRIF1-202ENST00000485275 AHSPQ9NZD4 102 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 ADAM29Q9UKF5 820 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 PLCL2Q9UPR0 1127 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 NEUROG3Q9Y4Z2 214 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 FER1L5A0AVI2 2057 aa13.8□□□□□ -0.2
LRIF1-202ENST00000485275 TMEM150CB9EJG8 249 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 TOX3O15405 576 aaPredicted RBP13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ZSCAN9O15535 394 aaPredicted RBP13.79□□□□□ -0.2
LRIF1-202ENST00000485275 SRPX2O60687 465 aaPredicted RBP13.79□□□□□ -0.2
LRIF1-202ENST00000485275 GCGRP47871 477 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 MAPK12P53778 367 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 OLR1P78380 273 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 BTN3A2P78410 334 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 TLR1Q15399 786 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 MPEG1Q2M385 716 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ASRGL1Q7L266 308 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ASCL5Q7RTU5 278 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 KMT5CQ86Y97 462 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ZCCHC7Q8N3Z6 543 aaKnown RBP13.79□□□□□ -0.2
LRIF1-202ENST00000485275 KIF2BQ8N4N8 673 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 TESCQ96BS2 214 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ZNF501Q96CX3 271 aaPredicted RBP13.79□□□□□ -0.2
LRIF1-202ENST00000485275 RNF31Q96EP0 1072 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 CENPKQ9BS16 269 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 TBCDQ9BTW9 1192 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 TXLNGQ9NUQ3 528 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 MRGBPQ9NV56 204 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 SIDT1Q9NXL6 827 aaKnown RBP13.79□□□□□ -0.2
LRIF1-202ENST00000485275 TAS2R1Q9NYW7 299 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 C5AR2Q9P296 337 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 MAP10Q9P2G4 905 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ATG4BQ9Y4P1 393 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ASB4Q9Y574 426 aa13.79□□□□□ -0.2
LRIF1-202ENST00000485275 ZFHX2Q9C0A1 2572 aaPredicted RBP13.79□□□□□ -0.2
LRIF1-202ENST00000485275 FITM1A5D6W6 292 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 WASHC1A8K0Z3 465 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 GABRR3A8MPY1 467 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 AIM2O14862 343 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 KIAA0754O94854 1291 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 FURINP09958 794 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 ALOX12P18054 663 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 ITGAXP20702 1163 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 ARFIP1P53367 373 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 WNT3P56703 355 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 KCNK10P57789 538 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 SLC25A3Q00325 362 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 PDE7AQ13946 482 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 C16orf72Q14CZ0 275 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 FAM180BQ6P0A1 224 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 SLC2A7Q6PXP3 512 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 PAGE2Q7Z2X7 111 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 PIP4P1Q86T03 277 aa13.78□□□□□ -0.2
LRIF1-202ENST00000485275 OR5T3Q8NGG3 340 aa13.78□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms