RNA–Protein interactions for RNA: ENST00000482192.5

HMGN1-213, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3

Gene HMGN1, Length 793 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-213ENST00000482192 PAPD4Q6PIY7 484 aaKnown RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 QSOX2Q6ZRP7 698 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 TRMT10CQ7L0Y3 403 aaKnown RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 VN1R5Q7Z5H4 357 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 CA13Q8N1Q1 262 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 CISD2Q8N5K1 135 aaKnown RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ADAMTS18Q8TE60 1221 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 TSLPQ969D9 159 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 GPR78Q96P69 363 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 LPAR4Q99677 370 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 NPLQ9BXD5 320 aaPredicted RBP11.18□□□□□ -0.62
HMGN1-213ENST00000482192 AICDAQ9GZX7 198 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 PRDM9Q9NQV7 894 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 ANGPTL3Q9Y5C1 460 aa11.18□□□□□ -0.62
HMGN1-213ENST00000482192 A0A0G2JN53 185 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 EXOC1LA0A1B0GW35 172 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 TCP11X1B4DZS4 312 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 POC1B-GALNT4F8VUJ3 575 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 B3GALT2O43825 422 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 TBX6O95947 436 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-213ENST00000482192 RHOXF2BP0C7M4 288 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 GNLYP22749 145 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 UQCRFS1P47985 274 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 PIK3CGP48736 1102 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 PLA2G16P53816 162 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 OR4D2P58180 307 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF33BQ06732 778 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 TSNAXIP1Q2TAA8 658 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 LGSNQ5TDP6 509 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 ABHD17BQ5VST6 288 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 METTL2BQ6P1Q9 378 aaKnown RBP11.17□□□□□ -0.62
HMGN1-213ENST00000482192 MED27Q6P2C8 311 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 LAS2Q8IYD9 372 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 TEX9Q8N6V9 391 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 ARMC2Q8NEN0 867 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 UHMK1Q8TAS1 419 aaKnown RBP11.17□□□□□ -0.62
HMGN1-213ENST00000482192 M1APQ8TC57 530 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 DCAKDQ8WVC6 231 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 HAS2Q92819 552 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 C19orf60Q96EN9 201 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 PTCHD1Q96NR3 888 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 SERINC2Q96SA4 455 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 RHOXF2Q9BQY4 288 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 RNF32Q9H0A6 362 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 COPS7BQ9H9Q2 264 aaPredicted RBP11.17□□□□□ -0.62
HMGN1-213ENST00000482192 MMP25Q9NPA2 562 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 AGPAT4Q9NRZ5 378 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 ASF1BQ9NVP2 202 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 TNPO3Q9Y5L0 923 aaKnown RBP11.17□□□□□ -0.62
HMGN1-213ENST00000482192 COPG1Q9Y678 874 aaKnown RBP11.17□□□□□ -0.62
HMGN1-213ENST00000482192 BSNQ9UPA5 3926 aa11.17□□□□□ -0.62
HMGN1-213ENST00000482192 ANKRD12Q6UB98 2062 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 IGKV3D-11A0A0A0MRZ8 115 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 TRAV17A0A0B4J275 112 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 TCRBV16S1A1N1A0A5B0 115 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 CLEC18AA5D8T8 446 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 A8MUI8 341 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 FAM227AF5H4B4 570 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 RBP1P09455 135 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 PCNAP12004 261 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 COL6A2P12110 1019 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 MAOAP21397 527 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 TNFSF10P50591 281 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 MTTPP55157 894 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 BTG2P78543 158 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 RUNX2Q13950 521 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 RCN2Q14257 317 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 PCBP2Q15366 365 aaKnown RBP eCLIP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 TMEM35AQ53FP2 167 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 TECRLQ5HYJ1 363 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 GRHL2Q6ISB3 625 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 H3F3CQ6NXT2 135 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 ABHD17CQ6PCB6 329 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 CLEC18BQ6UXF7 455 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 MYLK4Q86YV6 388 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 PLD6Q8N2A8 252 aaKnown RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 FAM26EQ8N5C1 309 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 CLEC18CQ8NCF0 446 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 CATSPER1Q8NEC5 780 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 SRFBP1Q8NEF9 429 aaKnown RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 OR7G3Q8NG95 312 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF473Q8WTR7 871 aaKnown RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 ZNF354BQ96LW1 612 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 MAGEB10Q96LZ2 347 aaPredicted RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 QRFPRQ96P65 431 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 KCNC2Q96PR1 638 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 F2RL3Q96RI0 385 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 BARD1Q99728 777 aaKnown RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 ROGDIQ9GZN7 287 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 ACTR8Q9H981 624 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 KCNK13Q9HB14 408 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 PRM3Q9NNZ6 103 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 PLA2G3Q9NZ20 509 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 STMN3Q9NZ72 180 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 CPSF2Q9P2I0 782 aaKnown RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 ADGRE2Q9UHX3 823 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 TMCO1Q9UM00 188 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 MRPS33Q9Y291 106 aaKnown RBP11.16□□□□□ -0.62
HMGN1-213ENST00000482192 MMACHCQ9Y4U1 282 aa11.16□□□□□ -0.62
HMGN1-213ENST00000482192 TENM4Q6N022 2769 aa11.16□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms