RNA–Protein interactions for RNA: ENST00000481109.5

PRPF4B-206, Transcript of pre-mRNA processing factor 4B, humanhuman

TSL 1 (best)

Gene PRPF4B, Length 2,364 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF4B-206ENST00000481109 LTB4R2Q9NPC1 389 aa9.99□□□□□ -0.81
PRPF4B-206ENST00000481109 WBP1LQ9NX94 342 aa9.99□□□□□ -0.81
PRPF4B-206ENST00000481109 NSMCE4AQ9NXX6 385 aa9.99□□□□□ -0.81
PRPF4B-206ENST00000481109 NLKQ9UBE8 527 aa9.99□□□□□ -0.81
PRPF4B-206ENST00000481109 FEM1BQ9UK73 627 aa9.99□□□□□ -0.81
PRPF4B-206ENST00000481109 MEIKINA0A087WXM9 373 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 MEX3AA1L020 520 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 SPATA31C2B4DYI2 1134 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 NDUFS8O00217 210 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 CASC3O15234 703 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 SLC37A4O43826 429 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 SDC3O75056 442 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 SEC22BO75396 215 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 OTCP00480 354 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 CBSLP0DN79 551 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 HAPLN1P10915 354 aaPredicted RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 HDCP19113 662 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 CBSP35520 551 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 PPM1AP35813 382 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 GCGRP47871 477 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 GRIA4P48058 902 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 GATMP50440 423 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 CLCN3P51790 818 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 SUCLG1P53597 346 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 BCAR1P56945 870 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 CD81P60033 236 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 GRM4Q14833 912 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 HADHQ16836 314 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 PROX2Q3B8N5 592 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 SLC35D3Q5M8T2 416 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 GPRC6AQ5T6X5 926 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 ATPAF1Q5TC12 328 aaPredicted RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 PDZD4Q76G19 769 aaPredicted RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 MCPH1Q8NEM0 835 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 OR1S1Q8NH92 325 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 FAF2Q96CS3 445 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 ZBED3Q96IU2 234 aaPredicted RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 KREMEN1Q96MU8 473 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 NT5C1BQ96P26 610 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 TEFMQ96QE5 360 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 GFM1Q96RP9 751 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 KCNJ15Q99712 375 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 CHCHD6Q9BRQ6 235 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 SARGQ9BW04 601 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 REEP4Q9H6H4 257 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 MEAF6Q9HAF1 191 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 GFOD1Q9NXC2 390 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 PAK5Q9P286 719 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 NPTNQ9Y639 398 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 CLCA3PQ9Y6N3 262 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 NUP98P52948 1817 aa9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 TNKS1BP1Q9C0C2 1729 aaKnown RBP9.98□□□□□ -0.81
PRPF4B-206ENST00000481109 TRAV19A0A0A6YYK7 116 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 FABP12A6NFH5 140 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 SGK494L7N484 410 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 SLC2A1P11166 492 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 PAX1P15863 534 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 RHCEP18577 417 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 NHLH2Q02577 135 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 MAP4K2Q12851 820 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 RAB33AQ14088 237 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 KRT33BQ14525 404 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 HNF4GQ14541 408 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 EIF4HQ15056 248 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 SNAPC1Q16533 368 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 FSCN1Q16658 493 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 INTS6LQ5JSJ4 861 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 TRIQKQ629K1 86 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 JADE1Q6IE81 842 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 GDPGP1Q6ZNW5 385 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 MOB2Q70IA6 237 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 PLEKHH3Q7Z736 793 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 LDLRAD3Q86YD5 345 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 ARMC10Q8N2F6 343 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 SPATA6LQ8N4H0 392 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 TMEM174Q8WUU8 243 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 KAT2AQ92830 837 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 TMEM125Q96AQ2 219 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 PABPC5Q96DU9 382 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 ZBED6CLQ96FA7 236 aaPredicted RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 SCRN2Q96FV2 425 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 MSLNLQ96KJ4 702 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 ZNF599Q96NL3 588 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 OR2M2Q96R28 347 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 KCTD15Q96SI1 283 aaPredicted RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 CYP2S1Q96SQ9 504 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 LRP2BPQ9P2M1 347 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 MAGEL2Q9UJ55 1249 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 ZNF222Q9UK12 451 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 METTL21EPA6NDL7 271 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 HCRTR2O43614 444 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 BEST1O76090 585 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 KDM4BO94953 1096 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 ATXN1LP0C7T5 689 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 HOXB6P17509 224 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 UQCRC2P22695 453 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 MAT2AP31153 395 aaKnown RBP9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 GAGE1Q13065 139 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 GBX1Q14549 363 aa9.97□□□□□ -0.81
PRPF4B-206ENST00000481109 ARHGAP19Q14CB8 494 aa9.97□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 62.5 ms