RNA–Protein interactions for RNA: ENST00000480461.1

TRA2B-212, Transcript of transformer 2 beta homolog, humanhuman

TSL 1 (best)

Gene TRA2B, Length 538 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRA2B-212ENST00000480461 ASPHQ12797 758 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 STX3Q13277 289 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 RUNX2Q13950 521 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 SLC9A5Q14940 896 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 SYT16Q17RD7 645 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 MUM1Q2TAK8 710 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 NKAIN1Q4KMZ8 207 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 DEFB134Q4QY38 66 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 YOD1Q5VVQ6 348 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 CYB5D1Q6P9G0 228 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 ABHD17CQ6PCB6 329 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 NLGN4XQ8N0W4 816 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 TBC1D19Q8N5T2 526 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 TTC29Q8NA56 475 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 NLGN4YQ8NFZ3 816 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 TTLQ8NG68 377 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 OR5T3Q8NGG3 340 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 CT55Q8WUE5 264 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 CCT6BQ92526 530 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 ZNF75CPQ92670 426 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 SEC16BQ96JE7 1060 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 CCNL2Q96S94 520 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 TRMOQ9BU70 441 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 ZNF717Q9BY31 904 aaPredicted RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 REXO4Q9GZR2 422 aaKnown RBP11.59□□□□□ -0.55
TRA2B-212ENST00000480461 PSD3Q9NYI0 1048 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 NDOR1Q9UHB4 597 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 NAALAD2Q9Y3Q0 740 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 TRAF6Q9Y4K3 522 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 CCL27Q9Y4X3 112 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 DNAJC15Q9Y5T4 150 aa11.59□□□□□ -0.55
TRA2B-212ENST00000480461 OR2W5A6NFC9 320 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ZNF860A6NHJ4 632 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 SNNO75324 88 aaPredicted RBP11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ENO1P06733 434 aaKnown RBP11.58□□□□□ -0.56
TRA2B-212ENST00000480461 HBQ1P09105 142 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 GP1BBP13224 206 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ALOX12P18054 663 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 PTX3P26022 381 aaPredicted RBP11.58□□□□□ -0.56
TRA2B-212ENST00000480461 CD82P27701 267 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 GSTM2P28161 218 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 SLC1A6P48664 564 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 EFNA3P52797 238 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 PLA2G16P53816 162 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 BTN3A2P78410 334 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 DCDP81605 110 aaKnown RBP11.58□□□□□ -0.56
TRA2B-212ENST00000480461 RGS1Q08116 209 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 MAP7Q14244 749 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 KHDRBS2Q5VWX1 349 aaKnown RBP11.58□□□□□ -0.56
TRA2B-212ENST00000480461 KANK2Q63ZY3 851 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 TTC19Q6DKK2 380 aaPredicted RBP11.58□□□□□ -0.56
TRA2B-212ENST00000480461 FAM198BQ6UWH4 519 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ZNF793Q6ZN11 406 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 OVCH1Q7RTY7 1134 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 VASH2Q86V25 355 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 LAPTM4BQ86VI4 370 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 CACNA2D3Q8IZS8 1091 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ZNF781Q8N8C0 355 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 OR2L5Q8NG80 312 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 AGR3Q8TD06 166 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 EXTL1Q92935 676 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 MR1Q95460 341 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 MMABQ96EY8 250 aaPredicted RBP11.58□□□□□ -0.56
TRA2B-212ENST00000480461 CMTM7Q96FZ5 175 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 NLNQ9BYT8 704 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 SLC29A3Q9BZD2 475 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ACBD3Q9H3P7 528 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 MANSC1Q9H8J5 431 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ZNF304Q9HCX3 659 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 TXLNGQ9NUQ3 528 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 PNPOQ9NVS9 261 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 ADGRE2Q9UHX3 823 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 SRPK3Q9UPE1 567 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 SEC16AO15027 2179 aa11.58□□□□□ -0.56
TRA2B-212ENST00000480461 SERTM1A2A2V5 107 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 TMEM114B3SHH9 223 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 FAM227AF5H4B4 570 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 PLPP1O14494 284 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 AZIN1O14977 448 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 ERI3O43414 337 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 ULK1O75385 1050 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 RDH16O75452 317 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 EEDO75530 441 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 KLF7O75840 302 aaPredicted RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 NSA2O95478 260 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 JUNP05412 331 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 KLK3P07288 261 aaPredicted RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 CCNYL3P0C7X3 344 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 UROSP10746 265 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 LIPCP11150 499 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 TCN2P20062 427 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 NR1D1P20393 614 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 GRK2P25098 689 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 BSGP35613 385 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 SERPINB5P36952 375 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 OLR1P78380 273 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 HMGCS1Q01581 520 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 TBL3Q12788 808 aaKnown RBP11.57□□□□□ -0.56
TRA2B-212ENST00000480461 IFT88Q13099 833 aa11.57□□□□□ -0.56
TRA2B-212ENST00000480461 CUL3Q13618 768 aa11.57□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 36.4 ms