RNA–Protein interactions for RNA: ENST00000480158.1

HERC4-210, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 4, humanhuman

TSL 2

Gene HERC4, Length 2,438 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC4-210ENST00000480158 PITHD1Q9GZP4 211 aaPredicted RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 BRF2Q9HAW0 419 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 FANCEQ9HB96 536 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 LHX9Q9NQ69 397 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 ADGRE2Q9UHX3 823 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 NAALAD2Q9Y3Q0 740 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 LOXL2Q9Y4K0 774 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 PCDHGA1Q9Y5H4 931 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 TEX51A0A1B0GUA7 166 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 GLOD5A6NK44 160 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 WASHC1A8K0Z3 465 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 UBDO15205 165 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 RRP9O43818 475 aaKnown RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 PCDH7O60245 1069 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 PRKRAO75569 313 aaKnown RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 SCRG1O75711 98 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 RSL1D1O76021 490 aaKnown RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 ANXA4P09525 319 aaPredicted RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 JMJD7P0C870 316 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 G6PDP11413 515 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 ETV5P41161 510 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 OR1D4P47884 311 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 ITGA1P56199 1179 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 RAE1P78406 368 aaKnown RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 MAT1AQ00266 395 aaKnown RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 ACY1Q03154 408 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 SLAMF1Q13291 335 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 CUL3Q13618 768 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 KIAA0040Q15053 153 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 RPS6KA2Q15349 733 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 SYT16Q17RD7 645 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 CCNYL2Q5T2Q4 361 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 OR4C11Q6IEV9 310 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 NOXRED1Q6NXP6 359 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 ABHD17CQ6PCB6 329 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 ZNF793Q6ZN11 406 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 PDSS2Q86YH6 399 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 MMP21Q8N119 569 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 CARFQ8N187 725 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 LIX1Q8N485 282 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 SLC38A9Q8NBW4 561 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 OR2L5Q8NG80 312 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 CHTF18Q8WVB6 975 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 ZDHHC19Q8WVZ1 309 aaPredicted RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 CLIP3Q96DZ5 547 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 MMABQ96EY8 250 aaPredicted RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 MAELQ96JY0 434 aaKnown RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 PPP3R2Q96LZ3 170 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 NDC1Q9BTX1 674 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 STRADBQ9C0K7 418 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 NMUR2Q9GZQ4 415 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 COPS7BQ9H9Q2 264 aaPredicted RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 NMRK1Q9NWW6 199 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 SLC39A1Q9NY26 324 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 DLL3Q9NYJ7 618 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 AKAP7Q9P0M2 348 aaPredicted RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 SEMA5BQ9P283 1151 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 FBXW2Q9UKT8 454 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 RARRES3Q9UL19 164 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 SATB2Q9UPW6 733 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 ARL2BPQ9Y2Y0 163 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 PCNX2A6NKB5 2137 aa6.1□□□□□ -1.43
HERC4-210ENST00000480158 CNOT1A5YKK6 2376 aaKnown RBP6.1□□□□□ -1.43
HERC4-210ENST00000480158 A0A1W2PNU3 283 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 OR2W5A6NFC9 320 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TMPRSS11DO60235 418 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 RDH16O75452 317 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 CDC123O75794 336 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 BCKDHAP12694 445 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 HSD3B1P14060 373 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ZNF28P17035 718 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ALOX12P18054 663 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 HSD3B2P26439 372 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 SERPINB1P30740 379 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 CCKBRP32239 447 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 BSGP35613 385 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ALDH9A1P49189 494 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 FOXL2P58012 376 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ERVK-8P63133 956 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 MC1RQ01726 317 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 RELAQ04206 551 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TRA2AQ13595 282 aaKnown RBP eCLIP6.09□□□□□ -1.43
HERC4-210ENST00000480158 GRM7Q14831 915 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 PRTGQ2VWP7 1150 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TCTE1Q5JU00 501 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 CDCP2Q5VXM1 449 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ANKRD26P1Q6NSI1 321 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TMEM214Q6NUQ4 689 aaKnown RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 CYP20A1Q6UW02 462 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ABHD13Q7L211 337 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ZFAND4Q86XD8 727 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 PPP1R3BQ86XI6 285 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 CACNA2D3Q8IZS8 1091 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 METTL4Q8N3J2 472 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 KRTCAP2Q8N6L1 136 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 ACOT4Q8N9L9 421 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 TTC29Q8NA56 475 aaPredicted RBP6.09□□□□□ -1.43
HERC4-210ENST00000480158 CCDC197Q8NCU1 140 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 OR9I1Q8NGQ6 314 aa6.09□□□□□ -1.43
HERC4-210ENST00000480158 NT5CQ8TCD5 201 aa6.09□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms