RNA–Protein interactions for RNA: ENST00000479897.5

TRAPPC12-218, Transcript of trafficking protein particle complex 12, humanhuman

TSL 3

Gene TRAPPC12, Length 454 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-218ENST00000479897 PLA2G16P53816 162 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 MTTPP55157 894 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 SNRPNP63162 240 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 RAE1P78406 368 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 EMX2Q04743 252 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 LSM12Q3MHD2 195 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 DEFB134Q4QY38 66 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 C3orf38Q5JPI3 329 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 SPDYAQ5MJ70 313 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 ZNF385CQ66K41 422 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR4C11Q6IEV9 310 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 MRM1Q6IN84 353 aaKnown RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 PRMT9Q6P2P2 845 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 DGLUCYQ7Z3D6 616 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 PIGWQ7Z7B1 504 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 PDSS2Q86YH6 399 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 GBP5Q96PP8 586 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 OR52B2Q96RD2 323 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 SERINC2Q96SA4 455 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 NPLQ9BXD5 320 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 TMEM120AQ9BXJ8 343 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 NRSN2Q9GZP1 204 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 WDR55Q9H6Y2 383 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 ACTR5Q9H9F9 607 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 COPS7BQ9H9Q2 264 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 ANKHQ9HCJ1 492 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 SCN3AQ9NY46 2000 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 PISDQ9UG56 409 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 CDC14AQ9UNH5 594 aa11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 TMEM184BQ9Y519 407 aaPredicted RBP11.9□□□□□ -0.5
TRAPPC12-218ENST00000479897 SDK2Q58EX2 2172 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 GOLGA8QA0A0J9YX86 632 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PMS2P1A4D2B8 440 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 GOLGA8OA6NCC3 632 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 GOLGA8NF8WBI6 632 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 SAP18O00422 153 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 RTCAO00442 366 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PCDH7O60245 1069 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PEX11AO75192 247 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 SH3BGRLO75368 114 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 DXOO77932 396 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 MYO1DO94832 1006 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 KLHL18O94889 574 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 DLGAP3O95886 979 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PRPS2P11908 318 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 CERS1P27544 350 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 HOXD11P31277 338 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 RORAP35398 523 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 AVPR1BP47901 424 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 RAB8AP61006 207 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 TRA2BP62995 288 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 ZNF763Q0D2J5 394 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 CAMK2BQ13554 666 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 DSG2Q14126 1118 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 GALNTL6Q49A17 601 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 RFTN2Q52LD8 501 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 METTL21CQ5VZV1 264 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 TTLL10Q6ZVT0 673 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PRSS41Q7RTY9 318 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 SPATA19Q7Z5L4 167 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 ACOT4Q8N9L9 421 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 FNDC5Q8NAU1 212 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 ADAMTS18Q8TE60 1221 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PMEPA1Q969W9 287 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 THOC1Q96FV9 657 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PPP1R36Q96LQ0 422 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 CCT8L2Q96SF2 557 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 DPH2Q9BQC3 489 aaPredicted RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 SPRY4Q9C004 299 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 BRINP2Q9C0B6 783 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 LYRM4Q9HD34 91 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PRM3Q9NNZ6 103 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 TXLNGQ9NUQ3 528 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 LYARQ9NX58 379 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 NOP53Q9NZM5 478 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 GIMAP2Q9UG22 337 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 WASF3Q9UPY6 502 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 WBP11Q9Y2W2 641 aaKnown RBP11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 NAALAD2Q9Y3Q0 740 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 PCDHGA7Q9Y5G6 932 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 B3GALT1Q9Y5Z6 326 aa11.89□□□□□ -0.51
TRAPPC12-218ENST00000479897 FAM149AA5PLN7 773 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 C9orf172C9J069 976 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 NVLO15381 856 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 B3GALT2O43825 422 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 EEDO75530 441 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 ALDOCP09972 364 aaKnown RBP11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 SDC1P18827 310 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 ITGAXP20702 1163 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 CD82P27701 267 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 MAPK10P53779 464 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 C21orf58P58505 322 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 GABREP78334 506 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 BTN3A2P78410 334 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 MAP7Q14244 749 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 RTP5Q14D33 572 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 TMEM164Q5U3C3 297 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 PRAMEF17Q5VTA0 474 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 NOXRED1Q6NXP6 359 aa11.88□□□□□ -0.51
TRAPPC12-218ENST00000479897 ZNF517Q6ZMY9 492 aaPredicted RBP11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms