RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 CRLF3Q8IUI8 442 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 CEP97Q8IW35 865 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 SLC5A8Q8N695 610 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 ANKRD53Q8N9V6 530 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 DNAJB8Q8NHS0 232 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 PYROXD1Q8WU10 500 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 ANKRD49Q8WVL7 239 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 ATP6V1G3Q96LB4 118 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 SLC6A16Q9GZN6 736 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 POPDC3Q9HBV1 291 aa13.47□□□□□ -0.25
ATG4B-218ENST00000479554 SCN2AQ99250 2005 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 PSMD12O00232 456 aaPredicted RBP13.46□□□□□ -0.25
ATG4B-218ENST00000479554 ZG16O60844 167 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 DNAJB6O75190 326 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 UNC5CO95185 931 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 PHBP35232 272 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 SLC26A5P58743 744 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 PMP22Q01453 160 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 TUBA3CQ13748 450 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 TOR1AIP1Q5JTV8 583 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 TUBA3EQ6PEY2 450 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 QSOX2Q6ZRP7 698 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 UHMK1Q8TAS1 419 aaKnown RBP13.46□□□□□ -0.25
ATG4B-218ENST00000479554 CDKL2Q92772 493 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 PTCHD1Q96NR3 888 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 UTP23Q9BRU9 249 aaKnown RBP13.46□□□□□ -0.25
ATG4B-218ENST00000479554 CENPHQ9H3R5 247 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 CLK4Q9HAZ1 481 aaKnown RBP13.46□□□□□ -0.25
ATG4B-218ENST00000479554 ANKRD10Q9NXR5 420 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 TXNDC16Q9P2K2 825 aa13.46□□□□□ -0.25
ATG4B-218ENST00000479554 ITPR2Q14571 2701 aa13.46□□□□□ -0.26
ATG4B-218ENST00000479554 CROCCQ5TZA2 2017 aa13.46□□□□□ -0.26
ATG4B-218ENST00000479554 SVILO95425 2214 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 NOTCH2Q04721 2471 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 NCF1BA6NI72 391 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 NCF1CA8MVU1 366 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 PRMT3O60678 531 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 PIAS1O75925 651 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 SERPINA6P08185 405 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 RNH1P13489 461 aaKnown RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 NCF1P14598 390 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 GNAZP19086 355 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 MST1P26927 711 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 SLC6A12P48065 614 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 POU4F1Q01851 419 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 SRSF11Q05519 484 aaKnown RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 HYAL2Q12891 473 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 OR1C1Q15619 314 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 ZRSR2Q15696 482 aaKnown RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 UBAP2Q5T6F2 1119 aaKnown RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 KLHDC8AQ8IYD2 350 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 CYP4X1Q8N118 509 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 MDS2Q8NDY4 140 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 FAM76AQ8TAV0 307 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 RHBDF1Q96CC6 855 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 TSPAN17Q96FV3 270 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 PGM2Q96G03 612 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 SIGLEC12Q96PQ1 595 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 NPAS2Q99743 824 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 MCMBPQ9BTE3 642 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 UNKQ9C0B0 810 aaKnown RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 DERL2Q9GZP9 239 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 STMN4Q9H169 189 aaPredicted RBP13.45□□□□□ -0.26
ATG4B-218ENST00000479554 RHBGQ9H310 441 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 KLHL31Q9H511 634 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 PPCSQ9HAB8 311 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 SMYD2Q9NRG4 433 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 SEC14L3Q9UDX4 400 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 PCDHGB6Q9Y5F9 930 aa13.45□□□□□ -0.26
ATG4B-218ENST00000479554 TRGV8A0A0C4DH27 118 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 SAGE2PA6NJ88 616 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 GABRR3A8MPY1 467 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 C4orf51C9J302 202 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 MAN1A2O60476 641 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 H2AFYO75367 372 aaKnown RBP13.44□□□□□ -0.26
ATG4B-218ENST00000479554 SMIM10L1P0DMW3 83 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 C1GALT1C1LP0DN25 315 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 CD46P15529 392 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 SSTR1P30872 391 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 CD96P40200 585 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 GDF5P43026 501 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 ST13P50502 369 aaKnown RBP13.44□□□□□ -0.26
ATG4B-218ENST00000479554 STXBP1P61764 594 aaKnown RBP13.44□□□□□ -0.26
ATG4B-218ENST00000479554 BTG2P78543 158 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 OC90Q02509 493 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-218ENST00000479554 RBPJQ06330 500 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 SLBPQ14493 270 aaKnown RBP eCLIP13.44□□□□□ -0.26
ATG4B-218ENST00000479554 TGFBIQ15582 683 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 C18orf21Q32NC0 220 aaPredicted RBP13.44□□□□□ -0.26
ATG4B-218ENST00000479554 TMIGD1Q6UXZ0 262 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 SLCO4C1Q6ZQN7 724 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 ZGRF1Q86YA3 2104 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 LGI4Q8N135 537 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 KRT78Q8N1N4 520 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 CA13Q8N1Q1 262 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 TCAIMQ8N3R3 496 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 HORMAD2Q8N7B1 307 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 ARMC2Q8NEN0 867 aa13.44□□□□□ -0.26
ATG4B-218ENST00000479554 TTLQ8NG68 377 aa13.44□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 54.8 ms