RNA–Protein interactions for RNA: ENST00000479532.1

SF3B1-209, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 587 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-209ENST00000479532 NFS1Q9Y697 457 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 U3KQA8 63 aa5.95□□□□□ -1.46
SF3B1-209ENST00000479532 KNL1Q8NG31 2342 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 DMDP11532 3685 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 FAM186AA6NE01 2351 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 GPR179Q6PRD1 2367 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PIPSLA2A3N6 862 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 HTR3EA5X5Y0 456 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 OR6C74A6NCV1 312 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 NPEPPSL1A6NEC2 478 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 OR5K3A6NET4 321 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ARHGEF33A8MVX0 844 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ISM1B1AKI9 464 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 SUPT3HB4E1H0 165 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 GFYI3L273 518 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 HGSO14964 777 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 KERAO60938 352 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 GLRA3O75311 464 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 SUPT3HO75486 399 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ALDOAP04075 364 aaKnown RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CELA3BP08861 270 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 SLC35E2BP0CK96 405 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TPBGLP0DKB5 382 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CD1DP15813 335 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ALOX15P16050 662 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TYRP1P17643 537 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 POLR2CP19387 275 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TFEBP19484 476 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TAC1P20366 129 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 GCAP28676 217 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PKLRP30613 574 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 RPA3P35244 121 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 MAGEA12P43365 314 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CAPZBP47756 277 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 HNMTP50135 292 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PNLIPRP1P54315 467 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CCL7P80098 99 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CDKL1Q00532 357 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TRA2AQ13595 282 aaKnown RBP eCLIP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TSTA3Q13630 321 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CYLC2Q14093 348 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 KIR2DS3Q14952 304 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ACAP2Q15057 778 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TSNQ15631 228 aaKnown RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ZXDCQ2QGD7 858 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PHF19Q5T6S3 580 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 BROXQ5VW32 411 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 TMEM71Q6P5X7 295 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 BORAQ6PGQ7 559 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 WDR74Q6RFH5 385 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CYHR1Q6ZMK1 362 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 DGLUCYQ7Z3D6 616 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ZNF761Q86XN6 746 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 SFTPA2Q8IWL1 248 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 SYTL1Q8IYJ3 562 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 NLGN4XQ8N0W4 816 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 LILRA2Q8N149 483 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CARFQ8N187 725 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 OR4D9Q8NGE8 314 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 OR2L8Q8NGY9 312 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 RHEBL1Q8TAI7 183 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 KCTD4Q8WVF5 259 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 SMPDL3AQ92484 453 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 KIAA1191Q96A73 305 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 EFHD2Q96C19 240 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 NXNL1Q96CM4 212 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 KLHL29Q96CT2 875 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 MED8Q96G25 268 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 UBXN10Q96LJ8 280 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PKP4Q99569 1192 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 YIPF4Q9BSR8 244 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 RAB33BQ9H082 229 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PCBD2Q9H0N5 130 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 RDH14Q9HBH5 336 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CCDC177Q9NQR7 707 aaPredicted RBP5.94□□□□□ -1.46
SF3B1-209ENST00000479532 FAIMQ9NVQ4 179 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 DLL3Q9NYJ7 618 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 WWOXQ9NZC7 414 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 NUDT4Q9NZJ9 180 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 CD274Q9NZQ7 290 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 LGALS13Q9UHV8 139 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 MID2Q9UJV3 735 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PLAGL1Q9UM63 463 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ICKQ9UPZ9 632 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PDE10AQ9Y233 779 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 ATP23Q9Y6H3 246 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 VPS13AQ96RL7 3174 aa5.94□□□□□ -1.46
SF3B1-209ENST00000479532 PRAMEF33A0A0G2JMD5 474 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TLCD2A6NGC4 264 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 D6RAR5 112 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 GOLGA8RI6L899 631 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 CDC7O00311 574 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 NTN3O00634 580 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 COPEO14579 308 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 TOX3O15405 576 aaPredicted RBP5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SUV39H1O43463 412 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 B4GAT1O43505 415 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 IDH3BO43837 385 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 SNX3O60493 162 aa5.93□□□□□ -1.46
SF3B1-209ENST00000479532 IPO13O94829 963 aaKnown RBP5.93□□□□□ -1.46
Retrieved 100 of 20,778 RNA–protein pairs in 26.4 ms