RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 ZNF181Q2M3W8 571 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 LIPIQ6XZB0 460 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 SLC39A5Q6ZMH5 540 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 CCDC103Q8IW40 242 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 PHF6Q8IWS0 365 aaKnown RBP eCLIP23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 METTL4Q8N3J2 472 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 LILRA3Q8N6C8 439 aaPredicted RBP23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 OR4K1Q8NGD4 311 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 NFKBIDQ8NI38 313 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF675Q8TD23 568 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 TCF25Q9BQ70 676 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZCCHC2Q9C0B9 1178 aaKnown RBP23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF226Q9NYT6 803 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 ANGPT4Q9Y264 503 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 HCN4Q9Y3Q4 1203 aa23.6■■□□□ 1.37
SYNGAP1-206ENST00000479510 UPK1BO75841 260 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 ELFN1P0C7U0 828 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 ARAFP10398 606 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 EPHA5P54756 1037 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 PCBP3P57721 371 aaKnown RBP23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 PRSS36Q5K4E3 855 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF852Q6ZMS4 543 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 Q6ZPB1 254 aaPredicted RBP23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 SYTL1Q8IYJ3 562 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 PROX1Q92786 737 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 FOXJ1Q92949 421 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 CAPNS2Q96L46 248 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 MARK1Q9P0L2 795 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 ITGB1BP2Q9UKP3 347 aa23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP23.59■■□□□ 1.37
SYNGAP1-206ENST00000479510 LTBP2Q14767 1821 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 PIPSLA2A3N6 862 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 CNOT3O75175 753 aaKnown RBP23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 GADD45AP24522 165 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 ATN1P54259 1190 aaPredicted RBP23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 TLE2Q04725 743 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 C2orf80Q0P641 193 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 TMEM215Q68D42 235 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF367Q7RTV3 350 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF513Q8N8E2 541 aaPredicted RBP23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 PPP1R16AQ96I34 528 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 PAK6Q9NQU5 681 aaPredicted RBP23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 IMPAD1Q9NX62 359 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 CNOT2Q9NZN8 540 aaKnown RBP23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 OGDHLQ9ULD0 1010 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 ZNF451Q9Y4E5 1061 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 KLK4Q9Y5K2 254 aa23.58■■□□□ 1.37
SYNGAP1-206ENST00000479510 EFCAB10A6NFE3 127 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 AGAP5A6NIR3 686 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 SH3BGRLO75368 114 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 OPN1SWP03999 348 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 CTSLP07711 333 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 PDHA2P29803 388 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 OTOP2Q7RTS6 562 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 CADM3Q8N126 398 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 STX19Q8N4C7 294 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 OR9A1PQ8NGU1 263 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 OTUB2Q96DC9 234 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 ACER3Q9NUN7 267 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 TBX21Q9UL17 535 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 FAM32AQ9Y421 112 aaKnown RBP23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 PCDHGA3Q9Y5H0 932 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 ENPP4Q9Y6X5 453 aa23.58■■□□□ 1.36
SYNGAP1-206ENST00000479510 FGF18O76093 207 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 RHCEP18577 417 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 CA8P35219 290 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 CHI3L1P36222 383 aaPredicted RBP23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 CCR2P41597 374 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 IDH2P48735 452 aaKnown RBP23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 LIMK1P53667 647 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 CDC42P60953 191 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 CATSPEREQ5SY80 951 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 NXPE4Q6UWF7 544 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 SLC5A11Q8WWX8 675 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 NIPSNAP1Q9BPW8 284 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 ZBTB20Q9HC78 741 aaPredicted RBP23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 TDP1Q9NUW8 608 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 RLIMQ9NVW2 624 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 PNMA8BQ9ULN7 279 aaPredicted RBP23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 ICKQ9UPZ9 632 aa23.57■■□□□ 1.36
SYNGAP1-206ENST00000479510 AQP9O43315 295 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 ADORA3P0DMS8 318 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 SYN1P17600 705 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 CBLP22681 906 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 DEFB103AP81534 67 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 ZNF45Q02386 682 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 PRKCDQ05655 676 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 ARHGAP15Q53QZ3 475 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 PSMA8Q8TAA3 256 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 SETD7Q8WTS6 366 aaKnown RBP23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 DTD2Q96FN9 168 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 CDCA4Q9BXL8 241 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 WDR37Q9Y2I8 494 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 WBP11Q9Y2W2 641 aaKnown RBP23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 PRAMEF25A6NGN4 478 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 ZBBXA8MT70 800 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 CCNB2O95067 398 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 MPEG1Q2M385 716 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 FAM92BQ6ZTR7 304 aa23.56■■□□□ 1.36
SYNGAP1-206ENST00000479510 TMCO2Q7Z6W1 182 aaPredicted RBP23.56■■□□□ 1.36
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms