RNA–Protein interactions for RNA: ENST00000479501.5

COL20A1-206, Transcript of collagen type XX alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL20A1, Length 4,536 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL20A1-206ENST00000479501 GALNT12Q8IXK2 581 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 TMEM125Q96AQ2 219 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 CAMK1GQ96NX5 476 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 SLC46A2Q9BY10 475 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 FARSBQ9NSD9 589 aaKnown RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 TAS2R9Q9NYW1 312 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 HSFX1Q9UBD0 423 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 GPR45Q9Y5Y3 372 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 CPNE3O75131 537 aaKnown RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 RAB8AP61006 207 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 SMU1Q2TAY7 513 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 MANEALQ5VSG8 457 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 FAM220AQ7Z4H9 259 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 TMEM173Q86WV6 379 aaPredicted RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 GPR135Q8IZ08 494 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 GPN1Q9HCN4 374 aaPredicted RBP13.81□□□□□ -0.2
COL20A1-206ENST00000479501 HCFC1R1Q9NWW0 138 aa13.81□□□□□ -0.2
COL20A1-206ENST00000479501 SLC16A8O95907 504 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 HLA-DQA2P01906 255 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ALPPP05187 535 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 PGFP49763 221 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 NUDT6P53370 316 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TUBA1BP68363 451 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 CDKL4Q5MAI5 379 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 KIAA1614Q5VZ46 1190 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TMEM53Q6P2H8 277 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF517Q6ZMY9 492 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TUBA1AQ71U36 451 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 KAT2AQ92830 837 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 GATA6Q92908 595 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ACSL5Q9ULC5 683 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 PCDHB11Q9Y5F2 797 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ECDO95905 644 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 PFKLP17858 780 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 MAGEA12P43365 314 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 OLFML2AQ68BL7 652 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 RANBP3LQ86VV4 465 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 COX18Q8N8Q8 333 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 POMGNT2Q8NAT1 580 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 HUS1BQ8NHY5 278 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 RFKQ969G6 155 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 SLC29A1Q99808 456 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TMEM45AQ9NWC5 275 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 LHX3Q9UBR4 397 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 SSC5DA1L4H1 1573 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 CAPN5O15484 640 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 VEGFDO43915 354 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TIMP1P01033 207 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 GGT1P19440 569 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ELK4P28324 431 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 FAUP35544 74 aaKnown RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 RAB39AQ14964 217 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 PON2Q15165 354 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 REEP3Q6NUK4 255 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 BADQ92934 168 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 IL17FQ96PD4 163 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 C12orf4Q9NQ89 552 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 MKL2Q9ULH7 1088 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 POLR1DQ9Y2S0 133 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 LY75O60449 1722 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 A0A0J9YVX5 310 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ALDOCP09972 364 aaKnown RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 XKP51811 444 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 C6orf141Q5SZD1 244 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TUBA3EQ6PEY2 450 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 FAM98AQ8NCA5 519 aaKnown RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 HDAC2Q92769 488 aaKnown RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ISG20Q96AZ6 181 aaKnown RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF689Q96CS4 500 aaPredicted RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 VMP1Q96GC9 406 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 EHD1Q9H4M9 534 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TBC1D17Q9HA65 648 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 UCKL1Q9NWZ5 548 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 TAS2R7Q9NYW3 318 aa13.8□□□□□ -0.2
COL20A1-206ENST00000479501 RPL36Q9Y3U8 105 aaKnown RBP13.8□□□□□ -0.2
COL20A1-206ENST00000479501 C6P13671 934 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 HOXB2P14652 356 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 PORP16435 677 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ARNTP27540 789 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 OR1E2P47887 323 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 TMBIM6P55061 237 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ITPRIPL2Q3MIP1 535 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 GTDC1Q4AE62 458 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 PEG10Q86TG7 708 aaKnown RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 DTWD1Q8N5C7 304 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ZNF433Q8N7K0 673 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 OR4E2Q8NGC2 313 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 RAB8BQ92930 207 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 MKLN1Q9UL63 735 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 MAN2B2Q9Y2E5 1009 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 HEPACAM2A8MVW5 462 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 ITPKBP27987 946 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 AVPR1BP47901 424 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 MCCD1P59942 119 aaPredicted RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 WDR5P61964 334 aaKnown RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 SLC7A9P82251 487 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 METTL2BQ6P1Q9 378 aaKnown RBP13.79□□□□□ -0.2
COL20A1-206ENST00000479501 RTL4Q6ZR62 310 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 NRSN1Q8IZ57 195 aa13.79□□□□□ -0.2
COL20A1-206ENST00000479501 CADM2Q8N3J6 435 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms