RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 BIRC2Q13490 618 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 LAPTM5Q13571 262 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 COL9A2Q14055 689 aaPredicted RBP6.36□□□□□ -1.39
USP48-208ENST00000479177 NR0B2Q15466 257 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 SF1Q15637 639 aaKnown RBP6.36□□□□□ -1.39
USP48-208ENST00000479177 SGO1Q5FBB7 561 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 KIAA1614Q5VZ46 1190 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 FAM91A1Q658Y4 838 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 TMEM198Q66K66 360 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ADNP2Q6IQ32 1131 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 KLHL35Q6PF15 583 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 C6orf89Q6UWU4 347 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 TMIGD1Q6UXZ0 262 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 Q6ZSR9 355 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 LARP4Q71RC2 724 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP48-208ENST00000479177 MTDHQ86UE4 582 aaKnown RBP6.36□□□□□ -1.39
USP48-208ENST00000479177 PAQR7Q86WK9 346 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP6.36□□□□□ -1.39
USP48-208ENST00000479177 KRT78Q8N1N4 520 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 MINDY1Q8N5J2 469 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 SUMF1Q8NBK3 374 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ZNF740Q8NDX6 193 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 OR7G3Q8NG95 312 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 CEP70Q8NHQ1 597 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 SELENOMQ8WWX9 145 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 UBE2E3Q969T4 207 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 TUBGCP3Q96CW5 907 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 REPS1Q96D71 796 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ERP27Q96DN0 273 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 TCTN2Q96GX1 697 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 RILPQ96NA2 401 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 PRAP1Q96NZ9 151 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 SLC38A3Q99624 504 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 PRRX2Q99811 253 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 DPH7Q9BTV6 452 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 GTPBP2Q9BX10 602 aaKnown RBP6.36□□□□□ -1.39
USP48-208ENST00000479177 PITHD1Q9GZP4 211 aaPredicted RBP6.36□□□□□ -1.39
USP48-208ENST00000479177 MYLK2Q9H1R3 596 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ZNF385DQ9H6B1 395 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 NT5DC2Q9H857 520 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 DMRT3Q9NQL9 472 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 PFDN4Q9NQP4 134 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 TMEM184CQ9NVA4 438 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 RIC8BQ9NVN3 520 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 HRASLS2Q9NWW9 162 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ANKMY1Q9P2S6 941 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 HEY2Q9UBP5 337 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 GIMAP2Q9UG22 337 aa6.36□□□□□ -1.39
USP48-208ENST00000479177 ZNF490Q9ULM2 529 aaPredicted RBP6.36□□□□□ -1.39
USP48-208ENST00000479177 MN1Q10571 1320 aaPredicted RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 COL5A1P20908 1838 aaPredicted RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 IGHV1OR21-1A0A087WYE8 117 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 OR2A25A4D2G3 310 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 SLC28A1O00337 649 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 FOXE1O00358 373 aaPredicted RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 LSM1O15116 133 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 RGS14O43566 566 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 RSL1D1O76021 490 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 ETHE1O95571 254 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 SERPINA6P08185 405 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ALDOCP09972 364 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 ZGLP1P0C6A0 271 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PCNAP12004 261 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 MYF5P13349 255 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PVRP15151 417 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 EZRP15311 586 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 TYRP1P17643 537 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 LBPP18428 481 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ATF4P18848 351 aaPredicted RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 MAGP20916 626 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PRPH2P23942 346 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 CXCR2P25025 360 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 CFPP27918 469 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 SERPINB1P30740 379 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 CSF2RBP32927 897 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 BCL6P41182 706 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 PIK3CBP42338 1070 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 GPR3P46089 330 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 MRPL19P49406 292 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 ATP4BP51164 291 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ERVK-8P63133 956 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 RPL38P63173 70 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 CYP4F2P78329 520 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 DDX39BQ13838 428 aaKnown RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 NAA25Q14CX7 972 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 HIST2H2ACQ16777 129 aaPredicted RBP6.35□□□□□ -1.39
USP48-208ENST00000479177 IMPG1Q17R60 797 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 SMU1Q2TAY7 513 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 SPDYAQ5MJ70 313 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 C6orf136Q5SQH8 315 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 METTL21CQ5VZV1 264 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 NXNQ6DKJ4 435 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 FCRL6Q6DN72 434 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 HIST2H2AA3Q6FI13 130 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ARMC6Q6NXE6 501 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 GUSBP11Q6P575 273 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 FIGLAQ6QHK4 219 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 TRPM8Q7Z2W7 1104 aa6.35□□□□□ -1.39
USP48-208ENST00000479177 ADCK2Q7Z695 626 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms