RNA–Protein interactions for RNA: ENST00000478658.1

USF3-202, Transcript of upstream transcription factor family member 3, humanhuman

APPRIS P2 TSL 5 BASIC

Gene USF3, Length 8,461 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF3-202ENST00000478658 OC90Q02509 493 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 TEKQ02763 1124 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 MAP4K2Q12851 820 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SPIN4Q56A73 249 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 PRPF38BQ5VTL8 546 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 TTC37Q6PGP7 1564 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 GSG1LQ6UXU4 331 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 NTAN1Q96AB6 310 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SMIM12Q96EX1 92 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 MRPL45Q9BRJ2 306 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 SUCNR1Q9BXA5 334 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 EQTNQ9NQ60 294 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 TAS2R3Q9NYW6 316 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 STEAP1Q9UHE8 339 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 TLL2Q9Y6L7 1015 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 XPNPEP2O43895 674 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 LYPLA1O75608 230 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 JMJD7P0C870 316 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 ARRB1P49407 418 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 ST3GAL1Q11201 340 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 IL24Q13007 206 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 HTR4Q13639 388 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 PDE7AQ13946 482 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 BCL2L15Q5TBC7 163 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 CXorf57Q6NSI4 855 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 SYNE4Q8N205 404 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 TOMM5Q8N4H5 51 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 ZFP41Q8N8Y5 198 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SLC7A13Q8TCU3 470 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 HTR3CQ8WXA8 447 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 FUBP3Q96I24 572 aaKnown RBP eCLIP5.27□□□□□ -1.57
USF3-202ENST00000478658 ZBED3Q96IU2 234 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 MTERF1Q99551 399 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 DHX33Q9H6R0 707 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 ITM2CQ9NQX7 267 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 GNG8Q9UK08 70 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 FAM96BQ9Y3D0 163 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 IRS2Q9Y4H2 1338 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 DISP3Q9P2K9 1392 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 TTC24A2A3L6 582 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 MEGF11A6BM72 1044 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 OR6C70A6NIJ9 312 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 FOXD2O60548 495 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 ADAM23O75077 832 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 CDKN2CP42773 168 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 RPS15P62841 145 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 RPL11P62913 178 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 POU5F1Q01860 360 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 EFEMP1Q12805 493 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 ACTBL2Q562R1 376 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 COX15Q7KZN9 410 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 DHDDSQ86SQ9 333 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 HS3ST5Q8IZT8 346 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 EIF4E3Q8N5X7 224 aaKnown RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 ESX1Q8N693 406 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SLC43A3Q8NBI5 491 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SLC35G2Q8TBE7 412 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 GLYATL2Q8WU03 294 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SAMD11Q96NU1 681 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SEPHS2Q99611 448 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 TMPRSS5Q9H3S3 457 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 SEC61A2Q9H9S3 476 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 ABCB6Q9NP58 842 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 UBE2J1Q9Y385 318 aaPredicted RBP5.27□□□□□ -1.57
USF3-202ENST00000478658 PCDHGA7Q9Y5G6 932 aa5.27□□□□□ -1.57
USF3-202ENST00000478658 DAPL1A0PJW8 107 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 EME2A4GXA9 379 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 BCKDKO14874 412 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 CHADO15335 359 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 CA12O43570 354 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PRKYO43930 277 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 IL7RP16871 459 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF37AP17032 561 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 APLNRP35414 380 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ID1P41134 155 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 RRADP55042 308 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OTUD1Q5VV17 481 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 HEPHL1Q6MZM0 1159 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PLEKHH3Q7Z736 793 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF546Q86UE3 836 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TUSC5Q8IXB3 177 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 DEFB107AQ8IZN7 70 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 PQLC1Q8N2U9 271 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 OLIG1Q8TAK6 271 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 SEMA4DQ92854 862 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 SLCO2A1Q92959 643 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 RHBGQ9H310 441 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 DPEP3Q9H4B8 488 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 B3GAT1Q9P2W7 334 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 RAB22AQ9UL26 194 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 YIPF1Q9Y548 306 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TERTO14746 1132 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 OIP5O43482 229 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 AK1P00568 194 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 TRBC1P01850 177 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 LPOP22079 712 aaPredicted RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 RPL5P46777 297 aaKnown RBP5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF91Q05481 1191 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 NRF1Q16656 503 aa5.26□□□□□ -1.57
USF3-202ENST00000478658 ZNF791Q3KP31 576 aaPredicted RBP5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms