RNA–Protein interactions for RNA: ENST00000478531.5

BRCA1-215, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,972 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-215ENST00000478531 UBL7Q96S82 380 aaPredicted RBP6.52□□□□□ -1.37
BRCA1-215ENST00000478531 TMEM109Q9BVC6 243 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 C1QTNF3Q9BXJ4 246 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 MS4A8Q9BY19 250 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 FAM117AQ9C073 453 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 OR51B5Q9H339 312 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 DMRT3Q9NQL9 472 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 MKS1Q9NXB0 559 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 SLC17A7Q9P2U7 560 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 BOLA1Q9Y3E2 137 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 KCNMB2Q9Y691 235 aa6.52□□□□□ -1.37
BRCA1-215ENST00000478531 MYO18BQ8IUG5 2567 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 IGLV3-12A0A075B6K2 115 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 A0A088AWK7 358 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 MAGEB17A8MXT2 336 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 H0YIV9 168 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 PSMD12O00232 456 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 RTCAO00442 366 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 PEX12O00623 359 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CHST10O43529 356 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 DNAJB6O75190 326 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 OR4F21O95013 312 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 BMP10O95393 424 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 MYZAPP0CAP1 466 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 IMPDH1P20839 514 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF10P21506 573 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 MMP11P24347 488 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 SERPINB1P30740 379 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 SSR2P43308 183 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 NAGLUP54802 743 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 EMP2P54851 167 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 RPS13P62277 151 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 EEF1A2Q05639 463 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 PCDH1Q08174 1060 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 TGM3Q08188 693 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 LCP2Q13094 533 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 IFT88Q13099 833 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 RAPSNQ13702 412 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 PCLAFQ15004 111 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 LINC00303Q3SY05 128 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 TCHHL1Q5QJ38 904 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 NIPAL1Q6NVV3 410 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 GPRIN3Q6ZVF9 776 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 IQCKQ8N0W5 287 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CDYL2Q8N8U2 506 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 FAM47BQ8NA70 645 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 RDH11Q8TC12 318 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 TCP10LQ8TDR4 215 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CCDC126Q96EE4 140 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 L3HYPDHQ96EM0 354 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CMTM7Q96FZ5 175 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 KCNC2Q96PR1 638 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 HBEGFQ99075 208 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CENPKQ9BS16 269 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 MECRQ9BV79 373 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 NTMT1Q9BV86 223 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 SORBS1Q9BX66 1292 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 TRIM55Q9BYV6 548 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 SHCBP1LQ9BZQ2 653 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 VN1R1Q9GZP7 353 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ING2Q9H160 280 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 GSTO2Q9H4Y5 243 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ELOVL6Q9H5J4 265 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 SEMA3GQ9NS98 782 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 P4HTMQ9NXG6 502 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 SENP1Q9P0U3 644 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 MID2Q9UJV3 735 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 FBXL4Q9UKA2 621 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 PLLPQ9Y342 182 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 HS3ST3B1Q9Y662 390 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 RP1L1Q8IWN7 2480 aaPredicted RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CROCCQ5TZA2 2017 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 GOLGA6L10A6NI86 522 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 A6NL46 340 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 AGPSO00116 658 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 SOCS6O14544 535 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CTIFO43310 598 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 B3GALT2O43825 422 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 B4GALT2O60909 372 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 MLYCDO95822 493 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 RECKO95980 971 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 FHP07954 510 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 RNH1P13489 461 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ACPPP15309 386 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 PIK3CBP42338 1070 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CCL11P51671 97 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 EFNA3P52797 238 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ABRAXAS2Q15018 415 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ADPRMQ3LIE5 342 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 GGTA1PQ4G0N0 100 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 KHDRBS2Q5VWX1 349 aaKnown RBP6.51□□□□□ -1.37
BRCA1-215ENST00000478531 LIPMQ5VYY2 423 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 FRG2Q64ET8 278 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ABHD17CQ6PCB6 329 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 LRIG3Q6UXM1 1119 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 ZNF793Q6ZN11 406 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 FRMD7Q6ZUT3 714 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 LANCL3Q6ZV70 420 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CHSY3Q70JA7 882 aa6.51□□□□□ -1.37
BRCA1-215ENST00000478531 CA13Q8N1Q1 262 aa6.51□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 38.1 ms