RNA–Protein interactions for RNA: ENST00000478288.5

ABCF3-212, Transcript of ATP binding cassette subfamily F member 3, humanhuman

TSL 3

Gene ABCF3, Length 754 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCF3-212ENST00000478288 TTLQ8NG68 377 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 CREB3L4Q8TEY5 395 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 NPLQ9BXD5 320 aaPredicted RBP12.14□□□□□ -0.47
ABCF3-212ENST00000478288 DEFB126Q9BYW3 111 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 ENKD1Q9H0I2 346 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 ASIC3Q9UHC3 531 aa12.14□□□□□ -0.47
ABCF3-212ENST00000478288 KLRC4-KLRK1H3BQV0 150 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 C19orf84I3L1E1 186 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 TFECO14948 347 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 SERPIND1P05546 499 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 SNRPB2P08579 225 aaKnown RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 HPDP32754 393 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 HSD17B7P56937 341 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 STXBP1P61764 594 aaKnown RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 BTG2P78543 158 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 ILF2Q12905 390 aaKnown RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 MORF4L2Q15014 288 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 FGD2Q7Z6J4 655 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 TMPRSS11BQ86T26 416 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 IGDCC3Q8IVU1 814 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 SCUBE1Q8IWY4 988 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 GPALPP1Q8IXQ4 340 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 CYP4X1Q8N118 509 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 CA13Q8N1Q1 262 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 NKAPQ8N5F7 415 aaKnown RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 C16orf52Q8NHV5 167 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 FAM57AQ8TBR7 257 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 GAL3ST3Q96A11 431 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 TSNARE1Q96NA8 513 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 PITHD1Q9GZP4 211 aaPredicted RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 PPANQ9NQ55 473 aaKnown RBP12.13□□□□□ -0.47
ABCF3-212ENST00000478288 NECTIN3Q9NQS3 549 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 PLSCR2Q9NRY7 297 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 ZFATQ9P243 1243 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 SLC22A14Q9Y267 594 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 OARD1Q9Y530 152 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 TEX264Q9Y6I9 313 aa12.13□□□□□ -0.47
ABCF3-212ENST00000478288 CTAGE15A4D2H0 777 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 BANF1O75531 89 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 B3GALT4O96024 378 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 IGFBP2P18065 325 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 GNAZP19086 355 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 IVDP26440 423 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 PTGS2P35354 604 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 KIR3DL1P43629 444 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 MEOX1P50221 254 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 ST13P50502 369 aaKnown RBP12.12□□□□□ -0.47
ABCF3-212ENST00000478288 RAB8AP61006 207 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 ARHGAP11AQ6P4F7 1023 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 TRMT10BQ6PF06 316 aaKnown RBP12.12□□□□□ -0.47
ABCF3-212ENST00000478288 SYDE1Q6ZW31 735 aaPredicted RBP12.12□□□□□ -0.47
ABCF3-212ENST00000478288 ADAMTSL2Q86TH1 951 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 CTAGE6Q86UF2 777 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 CYP4Z2PQ8N1L4 340 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 CA5BP1Q8WTZ4 195 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 VMP1Q96GC9 406 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 AICDAQ9GZX7 198 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 COQ3Q9NZJ6 369 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 SLC17A6Q9P2U8 582 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 IKZF3Q9UKT9 509 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 PPT2Q9UMR5 302 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 SNX12Q9UMY4 172 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 EML6Q6ZMW3 1958 aa12.12□□□□□ -0.47
ABCF3-212ENST00000478288 ZNF469Q96JG9 3925 aaPredicted RBP12.11□□□□□ -0.47
ABCF3-212ENST00000478288 A0A088AWK7 358 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 TRBV11-1A0A0K0K1C0 115 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 C4orf51C9J302 202 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 ITGA10O75578 1167 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 MYO1DO94832 1006 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 ZNF10P21506 573 aaPredicted RBP12.11□□□□□ -0.47
ABCF3-212ENST00000478288 PTGER1P34995 402 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 ELK3P41970 407 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 SLC6A12P48065 614 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 GPR143P51810 404 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 HSF1Q00613 529 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 TESK1Q15569 626 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 CMPK2Q5EBM0 449 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 TMEM211Q6ICI0 200 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 ZC3HC1Q86WB0 502 aaKnown RBP12.11□□□□□ -0.47
ABCF3-212ENST00000478288 CEP97Q8IW35 865 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 SULF2Q8IWU5 870 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP12.11□□□□□ -0.47
ABCF3-212ENST00000478288 TMEM156Q8N614 296 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 CHTF18Q8WVB6 975 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 FAR2Q96K12 515 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 WDR83Q9BRX9 315 aaKnown RBP12.11□□□□□ -0.47
ABCF3-212ENST00000478288 EHD1Q9H4M9 534 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 KLHL31Q9H511 634 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 NT5DC2Q9H857 520 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 POPDC3Q9HBV1 291 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 MCCC2Q9HCC0 563 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 ADAP2Q9NPF8 381 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 GPRC5BQ9NZH0 403 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 MRPS33Q9Y291 106 aaKnown RBP12.11□□□□□ -0.47
ABCF3-212ENST00000478288 YARS2Q9Y2Z4 477 aaKnown RBP12.11□□□□□ -0.47
ABCF3-212ENST00000478288 CLDN16Q9Y5I7 305 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 ABCA4P78363 2273 aa12.11□□□□□ -0.47
ABCF3-212ENST00000478288 NIPBLQ6KC79 2804 aaeCLIP12.1□□□□□ -0.47
ABCF3-212ENST00000478288 LRIT2A6NDA9 550 aa12.1□□□□□ -0.47
ABCF3-212ENST00000478288 CDC7O00311 574 aa12.1□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 49.3 ms