RNA–Protein interactions for RNA: ENST00000477935.1

VPS50-214, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 2

Gene VPS50, Length 760 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-214ENST00000477935 UQCRFS1P47985 274 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 LHX1P48742 406 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 GALCP54803 685 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 RPS3AP61247 264 aaKnown RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 PITX1P78337 314 aaPredicted RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 SPAG1Q07617 926 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 GOLGA8DPQ0D2H9 430 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 ZNF234Q14588 700 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 HECTD3Q5T447 861 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 SNX30Q5VWJ9 437 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 CYP20A1Q6UW02 462 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 PRPF39Q86UA1 669 aaKnown RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 CIARTQ8N365 385 aaPredicted RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 OR13A1Q8NGR1 328 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 OR2T34Q8NGX1 318 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 THAP6Q8TBB0 222 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 SLC38A5Q8WUX1 472 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 HTR3CQ8WXA8 447 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 ARHGEF26Q96DR7 871 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 SERAC1Q96JX3 654 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 WDFY2Q96P53 400 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 STRADBQ9C0K7 418 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 RANGRFQ9HD47 186 aaPredicted RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 TUFT1Q9NNX1 390 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 VPS54Q9P1Q0 977 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 OR14J1Q9UGF5 321 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 SUN2Q9UH99 717 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 LIMA1Q9UHB6 759 aaKnown RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 LSM7Q9UK45 103 aaKnown RBP4.33□□□□□ -1.72
VPS50-214ENST00000477935 GTF3C4Q9UKN8 822 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 DLGAP4Q9Y2H0 992 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 KCNE2Q9Y6J6 123 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 CSMD2Q7Z408 3487 aa4.33□□□□□ -1.72
VPS50-214ENST00000477935 FN1P02751 2386 aaKnown RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 UBE4BO95155 1302 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 PTPRJQ12913 1337 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 KLF18A0A0U1RQI7 1052 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 FAM237BA0A1B0GVD1 139 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 FAM47DPA6NHR8 397 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 EFCAB7A8K855 629 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 B4E171 279 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 HUS1O60921 280 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 RNASEH1O60930 286 aaKnown RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 WDR1O75083 606 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 RTN2O75298 545 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 JRKO75564 520 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 SLC25A12O75746 678 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 LDLRP01130 860 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 SP1P08047 785 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 CXCL8P10145 99 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 POLR2CP19387 275 aaPredicted RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 UGT1A5P35504 534 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 TSPAN7P41732 249 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 LEPRP48357 1165 aaKnown RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 FMO5P49326 533 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 MFAP3P55082 362 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 RPS14P62263 151 aaKnown RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 PHEXP78562 749 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 POU5F1Q01860 360 aaKnown RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 TAF10Q12962 218 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 MAD2L1Q13257 205 aaPredicted RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 ZNF177Q13360 481 aaPredicted RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 GTF2H2Q13888 395 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 ZNF776Q68DI1 518 aaPredicted RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 C18orf63Q68DL7 685 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 GTF2H2CQ6P1K8 395 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 FAM171BQ6P995 826 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 NCEH1Q6PIU2 408 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 TPGS1Q6ZTW0 290 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 GPR180Q86V85 440 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 CATSPER3Q86XQ3 398 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 MCEMP1Q8IX19 187 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 GANCQ8TET4 914 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 APOBEC4Q8WW27 367 aaKnown RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 C7orf26Q96N11 449 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 PKMYT1Q99640 499 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 KIFC3Q9BVG8 833 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 LRRC2Q9BYS8 371 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 SLC2A11Q9BYW1 496 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 ASB7Q9H672 318 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 IRAK4Q9NWZ3 460 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 FBXL12Q9NXK8 326 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 DDX43Q9NXZ2 648 aaKnown RBP4.32□□□□□ -1.72
VPS50-214ENST00000477935 MDFICQ9P1T7 246 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 ZNF510Q9Y2H8 683 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 C2CD2Q9Y426 696 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 LRRK1Q38SD2 2015 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 DENND4CQ5VZ89 1909 aa4.32□□□□□ -1.72
VPS50-214ENST00000477935 NUMA1Q14980 2115 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 TNFSF12-TNFSF13A0A0A6YY99 330 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 C10orf142B7Z368 130 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 H0YCG3 227 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 KCNN4O15554 427 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 ZNHIT1O43257 154 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 COCHO43405 550 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 LATO43561 262 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 FGF17O60258 216 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 JAK2O60674 1132 aa4.31□□□□□ -1.72
VPS50-214ENST00000477935 DIAPH2O60879 1101 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 42.8 ms