RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 ATP5A1P25705 553 aaKnown RBP18.89■□□□□ 0.61
ACTB-210ENST00000477812 STAT5AP42229 794 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 TSFMP43897 325 aaKnown RBP18.89■□□□□ 0.61
ACTB-210ENST00000477812 BTN3A2P78410 334 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 BTKQ06187 659 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 TGM3Q08188 693 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 SNIP1Q8TAD8 396 aaKnown RBP18.89■□□□□ 0.61
ACTB-210ENST00000477812 CHTF18Q8WVB6 975 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 NKD1Q969G9 470 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 C3orf30Q96M34 536 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 DDX31Q9H8H2 851 aaKnown RBP18.89■□□□□ 0.61
ACTB-210ENST00000477812 PADI1Q9ULC6 663 aa18.89■□□□□ 0.61
ACTB-210ENST00000477812 IGLV3-12A0A075B6K2 115 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 SKAP2O75563 359 aaPredicted RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 RSL1D1O76021 490 aaKnown RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 KLK3P07288 261 aaPredicted RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 LINC00032P0C843 101 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 HIST1H1TP22492 207 aaPredicted RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 CERS1P27544 350 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 AVPR1BP47901 424 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 RAP1GDS1P52306 607 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 MTTPP55157 894 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 OR4C11Q6IEV9 310 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 NIPAL1Q6NVV3 410 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 FAM199XQ6PEV8 388 aaPredicted RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 MAVSQ7Z434 540 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 COMMD6Q7Z4G1 85 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 ZCCHC7Q8N3Z6 543 aaKnown RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 ACOT4Q8N9L9 421 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 OR5T3Q8NGG3 340 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 FGF11Q92914 225 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 MR1Q95460 341 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 C19orf60Q96EN9 201 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 MMABQ96EY8 250 aaPredicted RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 APIPQ96GX9 242 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 FAR2Q96K12 515 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 CCT7Q99832 543 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 CENPKQ9BS16 269 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 CLK4Q9HAZ1 481 aaKnown RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 ZNF304Q9HCX3 659 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 MARCOQ9UEW3 520 aaPredicted RBP18.88■□□□□ 0.61
ACTB-210ENST00000477812 MAP4K5Q9Y4K4 846 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 CHD8Q9HCK8 2581 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 CELSR3Q9NYQ7 3312 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 SCN3AQ9NY46 2000 aa18.88■□□□□ 0.61
ACTB-210ENST00000477812 A0A0A6YYD5 115 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 TCP11X1B4DZS4 312 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 SLC28A1O00337 649 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 ZNF195O14628 629 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 CNOT3O75175 753 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 EEDO75530 441 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 AGXTP21549 392 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 FBLP22087 321 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 SSR2P43308 183 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 PCBP4P57723 403 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 MAT1AQ00266 395 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 CLN3Q13286 438 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 RUNX2Q13950 521 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 SLC9A5Q14940 896 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 KIAA0040Q15053 153 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 TGIF1Q15583 401 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 PDCD2Q16342 344 aaPredicted RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 SYT16Q17RD7 645 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 ARHGAP40Q5TG30 622 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 MRPL14Q6P1L8 145 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 DDIASQ8IXT1 998 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 CACNA2D3Q8IZS8 1091 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 C1orf52Q8N6N3 182 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 PIWIL2Q8TC59 973 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 CT55Q8WUE5 264 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 FKBP10Q96AY3 582 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 SERINC2Q96SA4 455 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 ROGDIQ9GZN7 287 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 SLC26A1Q9H2B4 701 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 CCDC86Q9H6F5 360 aaKnown RBP18.87■□□□□ 0.61
ACTB-210ENST00000477812 NMRK1Q9NWW6 199 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 SIRT5Q9NXA8 310 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 CTSFQ9UBX1 484 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 ADAM29Q9UKF5 820 aa18.87■□□□□ 0.61
ACTB-210ENST00000477812 A0A088AWK7 358 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 C1QTNF9BB2RNN3 333 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 LSM1O15116 133 aaKnown RBP18.86■□□□□ 0.61
ACTB-210ENST00000477812 HDAC3O15379 428 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 TMPRSS11DO60235 418 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 EDF1O60869 148 aaKnown RBP18.86■□□□□ 0.61
ACTB-210ENST00000477812 C1QTNF9P0C862 333 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 ZNF10P21506 573 aaPredicted RBP18.86■□□□□ 0.61
ACTB-210ENST00000477812 TPP2P29144 1249 aaPredicted RBP18.86■□□□□ 0.61
ACTB-210ENST00000477812 SKP1P63208 163 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 OLR1P78380 273 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 RAE1P78406 368 aaKnown RBP18.86■□□□□ 0.61
ACTB-210ENST00000477812 NCF4Q15080 339 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 AP5B1Q2VPB7 878 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 MRM1Q6IN84 353 aaKnown RBP18.86■□□□□ 0.61
ACTB-210ENST00000477812 GALNT18Q6P9A2 607 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 FAM47EQ6ZV65 393 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 OVCH1Q7RTY7 1134 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 NUDT13Q86X67 352 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 CRLF3Q8IUI8 442 aa18.86■□□□□ 0.61
ACTB-210ENST00000477812 WDR75Q8IWA0 830 aaKnown RBP18.86■□□□□ 0.61
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms