RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 FREM3P0C091 2139 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 ZSCAN5DPP0CG00 497 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 ZNF888P0CJ79 500 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 CDH1P12830 882 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 ENO3P13929 434 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 OGNP20774 298 aaKnown RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 UQCRC1P31930 480 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 GRK3P35626 688 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 NPY2RP49146 381 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 GPR143P51810 404 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 SKP1P63208 163 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 HYAL2Q12891 473 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 PWP1Q13610 501 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 DAZAP2Q15038 168 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 TERF2Q15554 542 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 FLYWCH1Q4VC44 716 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 XKR6Q5GH73 641 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 NIPAL1Q6NVV3 410 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 C16orf47Q6ZP98 133 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 UBE2R2Q712K3 238 aaPredicted RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 PIWIL4Q7Z3Z4 852 aaKnown RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 PEX26Q7Z412 305 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 UBL4BQ8N7F7 174 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 FAM222BQ8WU58 562 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 SARGQ9BW04 601 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 LACRTQ9GZZ8 138 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 EIF2B3Q9NR50 452 aaKnown RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 SYBUQ9NX95 663 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 PAK5Q9P286 719 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 ACAD8Q9UKU7 415 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 AMFRQ9UKV5 643 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 ERVK-11Q9UQG0 969 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 ZNF148Q9UQR1 794 aa10.56□□□□□ -0.72
BRCA1-213ENST00000476777 DRG1Q9Y295 367 aaKnown RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 YARS2Q9Y2Z4 477 aaKnown RBP10.56□□□□□ -0.72
BRCA1-213ENST00000476777 NINQ8N4C6 2090 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 A8MVJ9 347 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 G3V3Y1 287 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 PRKNO60260 465 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 CEP104O60308 925 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 WDR1O75083 606 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 OR2J2O76002 312 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 F7P08709 466 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 NPPBP16860 134 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 MGAT1P26572 445 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 RPL22P35268 128 aaKnown RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 CYLC1P35663 651 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 MAGEA5P43359 124 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 KEAP1Q14145 624 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 C1orf185Q5T7R7 199 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 RIPPLY2Q5TAB7 128 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 NDUFAF5Q5TEU4 345 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 KIAA0930Q6ICG6 404 aaPredicted RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 NEPROQ6NW34 567 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 ZNF549Q6P9A3 640 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 MBOAT1Q6ZNC8 495 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 CHSY3Q70JA7 882 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 GPALPP1Q8IXQ4 340 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 FAM109AQ8N4B1 249 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 TMEM251Q8N6I4 163 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 CCDC89Q8N998 374 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 ARMC2Q8NEN0 867 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 ABHD11Q8NFV4 315 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 OR4K1Q8NGD4 311 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 SPATA3Q8NHX4 192 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 CD200R1Q8TD46 325 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 C1orf54Q8WWF1 131 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 NANOS1Q8WY41 292 aaKnown RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 KCNJ9Q92806 393 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 NCLNQ969V3 563 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 VMP1Q96GC9 406 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 SH3GL2Q99962 352 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 CNPPD1Q9BV87 410 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 REPIN1Q9BWE0 567 aaKnown RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 SGPP1Q9BX95 441 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 ATG10Q9H0Y0 220 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 CLK4Q9HAZ1 481 aaKnown RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 HPF1Q9NWY4 346 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 ZFATQ9P243 1243 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 B4GALT7Q9UBV7 327 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 SOX13Q9UN79 622 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 VPS9D1Q9Y2B5 631 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 DHRS7Q9Y394 339 aa10.55□□□□□ -0.72
BRCA1-213ENST00000476777 REXO2Q9Y3B8 237 aaKnown RBP10.55□□□□□ -0.72
BRCA1-213ENST00000476777 MIF4GDA9UHW6 222 aaKnown RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 FAM47E-STBD1D6RA91 191 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 AP3B1O00203 1094 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 OR1F1O43749 312 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 SUSD5O60279 629 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 ZFAND5O76080 213 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 OR6B1O95007 311 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 CELA3AP09093 270 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 RNH1P13489 461 aaKnown RBP10.54□□□□□ -0.72
BRCA1-213ENST00000476777 CCR8P51685 355 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 FOXO1Q12778 655 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 NAE1Q13564 534 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 AGTRAPQ6RW13 159 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 LCTLQ6UWM7 567 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 IL20RBQ6UXL0 311 aa10.54□□□□□ -0.72
BRCA1-213ENST00000476777 GK5Q6ZS86 529 aa10.54□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 47.6 ms