RNA–Protein interactions for RNA: ENST00000475728.5

ABCF3-211, Transcript of ATP binding cassette subfamily F member 3, human

TSL 3

Gene ABCF3, Length 503 nt, Biotype retained intron, Subcellular localisation Cytosol .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABCF3-211	ENST00000475728	VN1R5	Q7Z5H4	357 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	TMEM151A	Q8N4L1	468 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	ZNF473	Q8WTR7	871 aa	Known RBP	13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	PEX11G	Q96HA9	241 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	SERINC2	Q96SA4	455 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	TBCD	Q9BTW9	1192 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	NTMT1	Q9BV86	223 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	C1QTNF3	Q9BXJ4	246 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	ERVK-6	Q9BXR3	956 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	MS4A8	Q9BY19	250 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	VN1R1	Q9GZP7	353 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	C5AR2	Q9P296	337 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	MID2	Q9UJV3	735 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	STK38L	Q9Y2H1	464 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	MYO18B	Q8IUG5	2567 aa		13.64	□□□□□ -0.23
ABCF3-211	ENST00000475728	NSG1	A0A0A6YYJ2	146 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728		A0A1W2PPM1	405 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	SYNDIG1L	A6NDD5	238 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728		A6NL46	340 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	PYCARD-AS1	I3L0S3	204 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	COPE	O14579	308 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	SBK3	P0C264	359 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	ICAM2	P13598	275 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	ITGA3	P26006	1051 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	PTX3	P26022	381 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	CRHR1	P34998	444 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	TSFM	P43897	325 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	ARFIP1	P53367	373 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	PLA2G16	P53816	162 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	MTTP	P55157	894 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	SNRPN	P63162	240 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	MYBPC3	Q14896	1274 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	CPSF6	Q16630	551 aa	Known RBP eCLIP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	AP5B1	Q2VPB7	878 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	ABHD17C	Q6PCB6	329 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	MILR1	Q7Z6M3	343 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	PLPP5	Q8NEB5	264 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	ARMC2	Q8NEN0	867 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	OR5T3	Q8NGG3	340 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	RDH11	Q8TC12	318 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	ZNF483	Q8TF39	744 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	F2RL3	Q96RI0	385 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	TMEM109	Q9BVC6	243 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	IQCG	Q9H095	443 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	MLXIPL	Q9NP71	852 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	ZNF71	Q9NQZ8	489 aa	Predicted RBP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	PSD3	Q9NYI0	1048 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	LGALS13	Q9UHV8	139 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	MRPS33	Q9Y291	106 aa	Known RBP	13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	TP53TG5	Q9Y2B4	290 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	SPACA6	W5XKT8	324 aa		13.63	□□□□□ -0.23
ABCF3-211	ENST00000475728	IGHV1-45	A0A0A0MS14	117 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	MAGEB17	A8MXT2	336 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728		B8ZZF3	427 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728		J3QKU1	62 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	FOXE1	O00358	373 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	CLDN4	O14493	209 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	OR7A17	O14581	309 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	DLX3	O60479	287 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	JRK	O75564	520 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	SUPT7L	O94864	414 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	MLYCD	O95822	493 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	MYL2	P10916	166 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	KRT4	P19013	534 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	IMPDH1	P20839	514 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	RAP1GDS1	P52306	607 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	PRKAA2	P54646	552 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	OLR1	P78380	273 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	IFT88	Q13099	833 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	DDX39B	Q13838	428 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	ZRSR2	Q15696	482 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	NSDHL	Q15738	373 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	GGTA1P	Q4G0N0	100 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	DEPDC1	Q5TB30	811 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	KHDRBS2	Q5VWX1	349 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	TTC19	Q6DKK2	380 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	FAAH2	Q6GMR7	532 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	RIPOR1	Q6ZS17	1223 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	SH2D5	Q6ZV89	423 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	CROCCP2	Q86T23	111 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	KBTBD2	Q8IY47	623 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	CYP4X1	Q8N118	509 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	CA13	Q8N1Q1	262 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	C7orf57	Q8NEG2	295 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	FDCSP	Q8NFU4	85 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	MYRIP	Q8NFW9	859 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	OR2W6P	Q8NHA6	318 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	HUS1B	Q8NHY5	278 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	TM9SF4	Q92544	642 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	RGMA	Q96B86	450 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	QRFPR	Q96P65	431 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	SMAD5	Q99717	465 aa	Known RBP	13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	TUBB6	Q9BUF5	446 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	AICDA	Q9GZX7	198 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	LHPP	Q9H008	270 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	ZNF700	Q9H0M5	742 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	SEMA4B	Q9NPR2	832 aa	Predicted RBP	13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	DMRT3	Q9NQL9	472 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	LANCL2	Q9NS86	450 aa		13.62	□□□□□ -0.23
ABCF3-211	ENST00000475728	ANAPC2	Q9UJX6	822 aa		13.62	□□□□□ -0.23

Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms