RNA–Protein interactions for RNA: ENST00000475251.1

SKA3-206, Transcript of spindle and kinetochore associated complex subunit 3, humanhuman

TSL 2

Gene SKA3, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA3-206ENST00000475251 GK5Q6ZS86 529 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 PIWIL4Q7Z3Z4 852 aaKnown RBP11.74□□□□□ -0.53
SKA3-206ENST00000475251 MDGA2Q7Z553 956 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 MYO1HQ8N1T3 1032 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 RPRMLQ8N4K4 120 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 RNF10Q8N5U6 811 aaKnown RBP11.74□□□□□ -0.53
SKA3-206ENST00000475251 APCDD1LQ8NCL9 501 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 PSD4Q8NDX1 1056 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 OR4K1Q8NGD4 311 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 GOT1L1Q8NHS2 421 aaPredicted RBP11.74□□□□□ -0.53
SKA3-206ENST00000475251 LRRC46Q96FV0 321 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 SMC6Q96SB8 1091 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 TTYH2Q9BSA4 534 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 ATG10Q9H0Y0 220 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 DEFB127Q9H1M4 99 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 CLEC4MQ9H2X3 399 aaPredicted RBP11.74□□□□□ -0.53
SKA3-206ENST00000475251 ZDHHC11Q9H8X9 412 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 FBXO6Q9NRD1 293 aaPredicted RBP11.74□□□□□ -0.53
SKA3-206ENST00000475251 HPF1Q9NWY4 346 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 KCMF1Q9P0J7 381 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 TRMT6Q9UJA5 497 aaKnown RBP11.74□□□□□ -0.53
SKA3-206ENST00000475251 ZFP69BQ9UJL9 534 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 SH2B3Q9UQQ2 575 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 PDE10AQ9Y233 779 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 MED16Q9Y2X0 877 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 L3MBTL1Q9Y468 752 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 MMACHCQ9Y4U1 282 aa11.74□□□□□ -0.53
SKA3-206ENST00000475251 A8MUA0 341 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 WDR1O75083 606 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 ZFAND5O76080 213 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 MYO1DO94832 1006 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 NPPBP16860 134 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 MAOAP21397 527 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 AHRP35869 848 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 KIR2DL3P43628 341 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 DGKQP52824 942 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 BTG2P78543 158 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 CTBP1Q13363 440 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 PHKG1Q16816 387 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 DUPD1Q68J44 220 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 ZNF585AQ6P3V2 769 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 ZNF549Q6P9A3 640 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 MAIP1Q8WWC4 291 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 ASB15Q8WXK1 588 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 ZNF669Q96BR6 464 aaPredicted RBP11.73□□□□□ -0.53
SKA3-206ENST00000475251 SPG11Q96JI7 2443 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 PNPLA3Q9NST1 481 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 B4GALT7Q9UBV7 327 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 PPIEQ9UNP9 301 aaKnown RBP11.73□□□□□ -0.53
SKA3-206ENST00000475251 MAD1L1Q9Y6D9 718 aa11.73□□□□□ -0.53
SKA3-206ENST00000475251 NAV3Q8IVL0 2385 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 IGHG3P01860 377 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 GLI4P10075 376 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 SCTRP47872 440 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 AP1S2P56377 157 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 CSHL1Q14406 222 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 HECTD2Q5U5R9 776 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 BIVMQ86UB2 503 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 DENND6AQ8IWF6 608 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 ZZZ3Q8IYH5 903 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 FAM109AQ8N4B1 249 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 TRPV3Q8NET8 790 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 OR2M7Q8NG81 312 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 GABPB2Q8TAK5 448 aaPredicted RBP11.72□□□□□ -0.53
SKA3-206ENST00000475251 UTP15Q8TED0 518 aaKnown RBP11.72□□□□□ -0.53
SKA3-206ENST00000475251 ATL1Q8WXF7 558 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 SARAFQ96BY9 339 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 MBD6Q96DN6 1003 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 SNF8Q96H20 258 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 BAG1Q99933 345 aaPredicted RBP11.72□□□□□ -0.53
SKA3-206ENST00000475251 GPATCH1Q9BRR8 931 aaKnown RBP11.72□□□□□ -0.53
SKA3-206ENST00000475251 AARSD1Q9BTE6 412 aaKnown RBP11.72□□□□□ -0.53
SKA3-206ENST00000475251 TRIM54Q9BYV2 358 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 TTTY12Q9BZ98 90 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 NECTIN3Q9NQS3 549 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 RASSF1Q9NS23 344 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 ZNF358Q9NW07 568 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 ARL15Q9NXU5 204 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 TAS2R13Q9NYV9 303 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 ZFATQ9P243 1243 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 ADAMTS6Q9UKP5 1117 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 CAPN6Q9Y6Q1 641 aa11.72□□□□□ -0.53
SKA3-206ENST00000475251 NIPBLQ6KC79 2804 aaeCLIP11.72□□□□□ -0.53
SKA3-206ENST00000475251 A0A0G2JNJ9 132 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 A0A1B0GTL3 188 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 A0A1B0GVC2 190 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 SDR42E2A6NKP2 422 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 FAM166BA8MTA8 275 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 CLDN4O14493 209 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 AQP7O14520 342 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 PROM1O43490 865 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 SUSD5O60279 629 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 DNAJB6O75190 326 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 MLNP12872 115 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 GABRA1P14867 456 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 SLC1A2P43004 574 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 DHX9Q08211 1270 aaKnown RBP11.71□□□□□ -0.53
SKA3-206ENST00000475251 HYAL2Q12891 473 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 WLSQ5T9L3 541 aa11.71□□□□□ -0.53
SKA3-206ENST00000475251 MBOAT1Q6ZNC8 495 aa11.71□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 39.9 ms