RNA–Protein interactions for RNA: ENST00000474246.1

SMARCE1-208, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 1 (best) BASIC

Gene SMARCE1, Length 2,124 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-208ENST00000474246 NXPH2O95156 264 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC16A8O95907 504 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TRIM49P0CI25 452 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TRIM49CP0CI26 452 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 GABRB1P18505 474 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ADRA2CP18825 462 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ACO1P21399 889 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 FGFR3P22607 806 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PKNOX1P55347 436 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CTBSQ01459 385 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 DSC1Q08554 894 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 SPEM2Q0P670 501 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TPD52L1Q16890 204 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 LRRC36Q1X8D7 754 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NDUFAF6Q330K2 333 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 KLHL12Q53G59 568 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 LDLRAP1Q5SW96 308 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PRAMEF8Q5VWM4 474 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 KHDRBS2Q5VWX1 349 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NCR3LG1Q68D85 454 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC9A4Q6AI14 798 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NADSYN1Q6IA69 706 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ANKRD26P1Q6NSI1 321 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NPSR1Q6W5P4 371 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 LRRC74BQ6ZQY2 392 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ZBTB49Q6ZSB9 765 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 GSTA5Q7RTV2 222 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 POLNQ7Z5Q5 900 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 GPR180Q86V85 440 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CATSPERDQ86XM0 798 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 FAM129CQ86XR2 697 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 LRRC56Q8IYG6 542 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ALLCQ8N6M5 410 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ANKRD44Q8N8A2 993 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 C8orf58Q8NAV2 365 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 DTWD2Q8NBA8 298 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 FBXL13Q8NEE6 735 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NUDT10Q8NFP7 164 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 OR2L5Q8NG80 312 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 OR56B1Q8NGI3 324 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 OR52B4Q8NGK2 314 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 S100PBPQ96BU1 408 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ECHDC3Q96DC8 303 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 RNF145Q96MT1 663 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CASD1Q96PB1 797 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 C12orf57Q99622 126 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 MAPKAP1Q9BPZ7 522 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CLPBQ9H078 707 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 MFSD1Q9H3U5 465 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ZMAT4Q9H898 229 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 OSER1Q9NX31 292 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TAS2R1Q9NYW7 299 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 GTSE1Q9NYZ3 720 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 AHSPQ9NZD4 102 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 KANSL3Q9P2N6 904 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC17A7Q9P2U7 560 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 EIF3KQ9UBQ5 218 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 NENFQ9UMX5 172 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PLA2G4CQ9UP65 541 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 MGAT4BQ9UQ53 548 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ARL2BPQ9Y2Y0 163 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 REXO2Q9Y3B8 237 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 HCFC2Q9Y5Z7 792 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 USH1CQ9Y6N9 552 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 DDX60Q8IY21 1712 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 MAST3O60307 1309 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 DMXL1Q9Y485 3027 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CREBBPQ92793 2442 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 A0A087WV48 116 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 A0A087WZ62 844 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 EDDM13A0A1B0GTR0 161 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 LOC730098B7Z3J9 87 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PEX12O00623 359 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ABCD4O14678 606 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ST8SIA3O43173 380 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PAPSS1O43252 624 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 DYRK3O43781 588 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PGK2P07205 417 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CA3P07451 260 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 GNAI3P08754 354 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC35E2BP0CK96 405 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC35E2P0CK97 266 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CBSLP0DN79 551 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TCP1P17987 556 aaKnown RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 EGR1P18146 543 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CBSP35520 551 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 FDFT1P37268 417 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 TALDO1P37837 337 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ETV4P43268 484 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 MAGEA6P43360 314 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 CXCR3P49682 368 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 ELLP55199 621 aaPredicted RBP5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 IL9RQ01113 521 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 FOXM1Q08050 763 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 SLC18A3Q16572 532 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PCID2Q5JVF3 399 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 PDSS1Q5T2R2 415 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 LIPMQ5VYY2 423 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 FAM91A1Q658Y4 838 aa5.83□□□□□ -1.48
SMARCE1-208ENST00000474246 HMBOX1Q6NT76 420 aa5.83□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms