RNA–Protein interactions for RNA: ENST00000474067.5

SNX13-206, Transcript of sorting nexin 13, humanhuman

TSL 3

Gene SNX13, Length 603 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX13-206ENST00000474067 SNX15Q9NRS6 342 aa19.27■□□□□ 0.68
SNX13-206ENST00000474067 DOCK10Q96BY6 2186 aa19.27■□□□□ 0.68
SNX13-206ENST00000474067 A0A096LPK6 155 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 LRIT2A6NDA9 550 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 ANKUB1A6NFN9 424 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 B4GALT2O60909 372 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 FAM155BO75949 473 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 KLHL2O95198 593 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 DDAH2O95865 285 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 C2P06681 752 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 EDN3P14138 238 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 MTTPP55157 894 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 HSD17B7P56937 341 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 CHIT1Q13231 466 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 DOC2AQ14183 400 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 TERF2Q15554 542 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 TSNAXIP1Q2TAA8 658 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 TMEM35AQ53FP2 167 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 PRR30Q53SZ7 412 aaPredicted RBP19.26■□□□□ 0.67
SNX13-206ENST00000474067 MED27Q6P2C8 311 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 CHSY3Q70JA7 882 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 IFT20Q8IY31 132 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 FAR1Q8WVX9 515 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 MS4A6EQ96DS6 147 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 ATOH8Q96SQ7 321 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 BARD1Q99728 777 aaKnown RBP19.26■□□□□ 0.67
SNX13-206ENST00000474067 RBCK1Q9BYM8 510 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 CDC42EP4Q9H3Q1 356 aaKnown RBP19.26■□□□□ 0.67
SNX13-206ENST00000474067 NINJ2Q9NZG7 142 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 PCDHGB6Q9Y5F9 930 aa19.26■□□□□ 0.67
SNX13-206ENST00000474067 A0A087WUV0 522 aaPredicted RBP19.25■□□□□ 0.67
SNX13-206ENST00000474067 A8MUI8 341 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 RBP1P09455 135 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 ALDH18A1P54886 795 aaKnown RBP19.25■□□□□ 0.67
SNX13-206ENST00000474067 RAB38P57729 211 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 PCDH1Q08174 1060 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 HYAL2Q12891 473 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 EFTUD2Q15029 972 aaKnown RBP eCLIP19.25■□□□□ 0.67
SNX13-206ENST00000474067 NR6A1Q15406 480 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 ADPRMQ3LIE5 342 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 ACER2Q5QJU3 275 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 H3F3CQ6NXT2 135 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 ZNF595Q8IYB9 648 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 CA13Q8N1Q1 262 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 FAM98AQ8NCA5 519 aaKnown RBP19.25■□□□□ 0.67
SNX13-206ENST00000474067 DNAJB8Q8NHS0 232 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 PRR7Q8TB68 274 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 MAGEB10Q96LZ2 347 aaPredicted RBP19.25■□□□□ 0.67
SNX13-206ENST00000474067 OLAHQ9NV23 265 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 SCN3AQ9NY46 2000 aa19.25■□□□□ 0.67
SNX13-206ENST00000474067 UGDHO60701 494 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 RASAL1O95294 804 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 CBX6O95503 412 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 COL6A2P12110 1019 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 MSH2P43246 934 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 UQCRFS1P47985 274 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 SLC26A5P58743 744 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 OLR1P78380 273 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 E2F2Q14209 437 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 C18orf21Q32NC0 220 aaPredicted RBP19.24■□□□□ 0.67
SNX13-206ENST00000474067 LIPJQ5W064 366 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 CYP4X1Q8N118 509 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 SSC4DQ8WTU2 575 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 NXNL1Q96CM4 212 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 MRRFQ96E11 262 aaKnown RBP19.24■□□□□ 0.67
SNX13-206ENST00000474067 MESP1Q9BRJ9 268 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 UTP23Q9BRU9 249 aaKnown RBP19.24■□□□□ 0.67
SNX13-206ENST00000474067 TBCDQ9BTW9 1192 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 IGSF5Q9NSI5 407 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 ZNF180Q9UJW8 692 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 PCDHGA11Q9Y5H2 935 aa19.24■□□□□ 0.67
SNX13-206ENST00000474067 UBR5O95071 2799 aaPredicted RBP19.24■□□□□ 0.67
SNX13-206ENST00000474067 IGHV3-20A0A0C4DH32 117 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 TCRBV16S1A1N1A0A5B0 115 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 SAGE2PA6NJ88 616 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 UBXN8O00124 270 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 FCHO1O14526 889 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 PRAMEF2O60811 474 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 ACSL3O95573 720 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 WDPCPO95876 746 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 ARFIP1P53367 373 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 PLA2G16P53816 162 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 PER3P56645 1201 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 NAA30Q147X3 362 aaPredicted RBP19.23■□□□□ 0.67
SNX13-206ENST00000474067 SETDB1Q15047 1291 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 GRHL2Q6ISB3 625 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 TMEM178AQ8NBL3 297 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 GRHL3Q8TE85 626 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 KCTD4Q8WVF5 259 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 SLC44A1Q8WWI5 657 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 C19orf60Q96EN9 201 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 CMTM7Q96FZ5 175 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 VPS11Q9H270 941 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 KLHL31Q9H511 634 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 PRTFDC1Q9NRG1 225 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 MS4A12Q9NXJ0 267 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 DMGDHQ9UI17 866 aaKnown RBP19.23■□□□□ 0.67
SNX13-206ENST00000474067 CSAG2Q9Y5P2 127 aa19.23■□□□□ 0.67
SNX13-206ENST00000474067 CD46P15529 392 aa19.22■□□□□ 0.67
SNX13-206ENST00000474067 SNRPNP63162 240 aaKnown RBP19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms