RNA–Protein interactions for RNA: ENST00000473969.6

USF1-205, Transcript of upstream transcription factor 1, humanhuman

TSL 5

Gene USF1, Length 1,092 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USF1-205ENST00000473969 C8orf89P0DMQ9 161 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 SMIM10L1P0DMW3 83 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 CPA3P15088 417 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 MTTPP55157 894 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 SNRPNP63162 240 aaKnown RBP12.99□□□□□ -0.33
USF1-205ENST00000473969 OLR1P78380 273 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 ASPHQ12797 758 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 CHAF1BQ13112 559 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 ADPRMQ3LIE5 342 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 DCAF10Q5QP82 559 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 CEP85LQ5SZL2 805 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 KHDRBS2Q5VWX1 349 aaKnown RBP12.99□□□□□ -0.33
USF1-205ENST00000473969 ABHD17CQ6PCB6 329 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 SH2D5Q6ZV89 423 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 VN1R5Q7Z5H4 357 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 EXD3Q8N9H8 876 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 ARMC2Q8NEN0 867 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 OR4F6Q8NGB9 312 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 OR52B6Q8NGF0 335 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 C9orf43Q8TAL5 461 aaPredicted RBP12.99□□□□□ -0.33
USF1-205ENST00000473969 ADAMTS18Q8TE60 1221 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 RGMAQ96B86 450 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 MTFMTQ96DP5 389 aaKnown RBP12.99□□□□□ -0.33
USF1-205ENST00000473969 SMIM10Q96HG1 83 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 TMEM237Q96Q45 408 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 MTERF1Q99551 399 aaKnown RBP12.99□□□□□ -0.33
USF1-205ENST00000473969 SLC25A23Q9BV35 468 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 MS4A8Q9BY19 250 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 SLC25A18Q9H1K4 315 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 ZBTB26Q9HCK0 441 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 FBXL4Q9UKA2 621 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 SNX6Q9UNH7 406 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 MRPS33Q9Y291 106 aaKnown RBP12.99□□□□□ -0.33
USF1-205ENST00000473969 TSC22D4Q9Y3Q8 395 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 HS3ST3B1Q9Y662 390 aa12.99□□□□□ -0.33
USF1-205ENST00000473969 NSG1A0A0A6YYJ2 146 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 FOXE1O00358 373 aaPredicted RBP12.98□□□□□ -0.33
USF1-205ENST00000473969 CLDN4O14493 209 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 SOCS6O14544 535 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 B4GALT2O60909 372 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 JRKO75564 520 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 CRCPO75575 148 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 CDC123O75794 336 aaPredicted RBP12.98□□□□□ -0.33
USF1-205ENST00000473969 UQCRHP07919 91 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 TSPAN8P19075 237 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 ITGA3P26006 1051 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 SSR2P43308 183 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 AIMP2Q13155 320 aaKnown RBP12.98□□□□□ -0.33
USF1-205ENST00000473969 NSDHLQ15738 373 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 GGTA1PQ4G0N0 100 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 UNC50Q53HI1 259 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 SOWAHCQ53LP3 525 aaPredicted RBP12.98□□□□□ -0.33
USF1-205ENST00000473969 DEPDC1Q5TB30 811 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 FRG2Q64ET8 278 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 CPZQ66K79 652 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 ADNP2Q6IQ32 1131 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 KIRREL2Q6UWL6 708 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 GPRIN3Q6ZVF9 776 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 RPS27LQ71UM5 84 aaKnown RBP12.98□□□□□ -0.33
USF1-205ENST00000473969 NDUFAF7Q7L592 441 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 BANPQ8N9N5 519 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 MYRIPQ8NFW9 859 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 L3HYPDHQ96EM0 354 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 ABHD17AQ96GS6 310 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 FRG2BQ96QU4 278 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 SERPINI1Q99574 410 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 RBCK1Q9BYM8 510 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 VN1R1Q9GZP7 353 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 STMN4Q9H169 189 aaPredicted RBP12.98□□□□□ -0.33
USF1-205ENST00000473969 OR51B5Q9H339 312 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 DMRT3Q9NQL9 472 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 NMRK1Q9NWW6 199 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 MKS1Q9NXB0 559 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 PSD3Q9NYI0 1048 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 TRPS1Q9UHF7 1281 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 EMCNQ9ULC0 261 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 PLLPQ9Y342 182 aa12.98□□□□□ -0.33
USF1-205ENST00000473969 GOLGA6L10A6NI86 522 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 MAGEB17A8MXT2 336 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 SAP18O00422 153 aaKnown RBP12.97□□□□□ -0.33
USF1-205ENST00000473969 PRMT3O60678 531 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 SPAG7O75391 227 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 DNAJB5O75953 348 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 HPP00738 406 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 KRT6AP02538 564 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 KRT6BP04259 564 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 ICAM2P13598 275 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 HMOX2P30519 316 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 TSFMP43897 325 aaKnown RBP12.97□□□□□ -0.33
USF1-205ENST00000473969 KRT6CP48668 564 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 NEK2P51955 445 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 PGDP52209 483 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 PKNOX1P55347 436 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 DNAJB13P59910 316 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 RPS13P62277 151 aaKnown RBP12.97□□□□□ -0.33
USF1-205ENST00000473969 AP2B1P63010 937 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 EEF1A2Q05639 463 aaKnown RBP12.97□□□□□ -0.33
USF1-205ENST00000473969 ACTN3Q08043 901 aaPredicted RBP12.97□□□□□ -0.33
USF1-205ENST00000473969 ZNF844Q08AG5 666 aa12.97□□□□□ -0.33
USF1-205ENST00000473969 LCP2Q13094 533 aa12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms