RNA–Protein interactions for RNA: ENST00000473212.1

COL18A1-207, Transcript of collagen type XVIII alpha 1 chain, humanhuman

TSL 2

Gene COL18A1, Length 2,515 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL18A1-207ENST00000473212 NEDD8-MDP1E9PL57 170 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 SSX4O60224 188 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 EIF2S1P05198 315 aaKnown RBP20.24■□□□□ 0.83
COL18A1-207ENST00000473212 MVDP53602 400 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 DMC1Q14565 340 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 IRF3Q14653 427 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 MED22Q15528 200 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 PRSS53Q2L4Q9 553 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 MMP21Q8N119 569 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 NFKBIDQ8NI38 313 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 CYB5D2Q8WUJ1 264 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 MRPS31Q92665 395 aaKnown RBP20.24■□□□□ 0.83
COL18A1-207ENST00000473212 CLP1Q92989 425 aaKnown RBP20.24■□□□□ 0.83
COL18A1-207ENST00000473212 NEIL2Q969S2 332 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 KCNS3Q9BQ31 491 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 FAM83DQ9H4H8 585 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 EHD3Q9NZN3 535 aa20.24■□□□□ 0.83
COL18A1-207ENST00000473212 ZNF282Q9UDV7 671 aaPredicted RBP20.24■□□□□ 0.83
COL18A1-207ENST00000473212 GOLGA4Q13439 2230 aaKnown RBP20.24■□□□□ 0.83
COL18A1-207ENST00000473212 PCDH17O14917 1159 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 IMPA1P29218 277 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 IFITM2Q01629 132 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 ZNF33BQ06732 778 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 SPANXN2Q5MJ10 180 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 GRHL2Q6ISB3 625 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 SLC39A11Q8N1S5 342 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 OR2A12Q8NGT7 310 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 COQ8BQ96D53 544 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 NUAK2Q9H093 628 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 HCFC1R1Q9NWW0 138 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 H0YIV9 168 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 URODP06132 367 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 CTSAP10619 480 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 TCEA1P23193 301 aaKnown RBP20.23■□□□□ 0.83
COL18A1-207ENST00000473212 BMPR1AP36894 532 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 EIF4HQ15056 248 aaKnown RBP20.23■□□□□ 0.83
COL18A1-207ENST00000473212 TSTQ16762 297 aaKnown RBP20.23■□□□□ 0.83
COL18A1-207ENST00000473212 TMEM215Q68D42 235 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 UTS2BQ765I0 119 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 TMPRSS11BQ86T26 416 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 RASGEF1AQ8N9B8 481 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 PSD4Q8NDX1 1056 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 ASZ1Q8WWH4 475 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 CRELD1Q96HD1 420 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 PKP4Q99569 1192 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 ZNF556Q9HAH1 456 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 C14orf119Q9NWQ9 140 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 KLK4Q9Y5K2 254 aa20.23■□□□□ 0.83
COL18A1-207ENST00000473212 FAM227AF5H4B4 570 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 PITPNM1O00562 1244 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 CTDSP2O14595 271 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 C6orf47O95873 294 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 SOX6P35712 828 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 CCR2P41597 374 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 OLR1P78380 273 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 SCARB2Q14108 478 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 CAMKMTQ7Z624 323 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 TMC8Q8IU68 726 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 CHTF18Q8WVB6 975 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 ZNF486Q96H40 463 aaPredicted RBP20.22■□□□□ 0.83
COL18A1-207ENST00000473212 RHCGQ9UBD6 479 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 OGDHLQ9ULD0 1010 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 ITM2BQ9Y287 266 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 AP1M2Q9Y6Q5 423 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 ZW10O43264 779 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 TNFRSF21O75509 655 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 SLCO2B1O94956 709 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 POP4O95707 220 aaKnown RBP20.22■□□□□ 0.83
COL18A1-207ENST00000473212 GSTM1P09488 218 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 ZNF8P17098 575 aaPredicted RBP20.22■□□□□ 0.83
COL18A1-207ENST00000473212 GANABQ14697 944 aaKnown RBP20.22■□□□□ 0.83
COL18A1-207ENST00000473212 PTGES3Q15185 160 aaKnown RBP20.22■□□□□ 0.83
COL18A1-207ENST00000473212 MPEG1Q2M385 716 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 CPXM2Q8N436 756 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 FAM129BQ96TA1 746 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 NRTNQ99748 197 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 SLC35A5Q9BS91 424 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 BRF2Q9HAW0 419 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 ERVK13-1Q9NX77 482 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 MKLN1Q9UL63 735 aa20.22■□□□□ 0.83
COL18A1-207ENST00000473212 DENND4CQ5VZ89 1909 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 MN1Q10571 1320 aaPredicted RBP20.21■□□□□ 0.83
COL18A1-207ENST00000473212 PLK4O00444 970 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 RNASET2O00584 256 aaKnown RBP20.21■□□□□ 0.83
COL18A1-207ENST00000473212 NPC1O15118 1278 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 TGM5O43548 720 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 HNF4AP41235 474 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 DEFA1P59665 94 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 DEFA3P59666 94 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 GCNT6Q5T4J0 391 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 GDPD4Q6W3E5 623 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 ZNF367Q7RTV3 350 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 IL17RDQ8NFM7 739 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 VWCEQ96DN2 955 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 SDHCQ99643 169 aaPredicted RBP20.21■□□□□ 0.83
COL18A1-207ENST00000473212 MGLLQ99685 303 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 LINC00597Q9H2U6 94 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 SPNS1Q9H2V7 528 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 FBXL12Q9NXK8 326 aa20.21■□□□□ 0.83
COL18A1-207ENST00000473212 LEFTY1O75610 366 aa20.21■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms