RNA–Protein interactions for RNA: ENST00000472282.5

SMC4-213, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 3

Gene SMC4, Length 667 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-213ENST00000472282 LCMT2O60294 686 aaKnown RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 SRPX2O60687 465 aaPredicted RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 PRAMEF4O60810 478 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 MED26O95402 600 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 RPS17P08708 135 aaKnown RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 MYZAPP0CAP1 466 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 C1GALT1C1LP0DN25 315 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 MYL2P10916 166 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 CD22P20273 847 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 OTX2P32243 289 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 CD97P48960 835 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 PGDP52209 483 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 IRF8Q02556 426 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 RELAQ04206 551 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 CHIT1Q13231 466 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 DOC2AQ14183 400 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 HKDC1Q2TB90 917 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 XKR6Q5GH73 641 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 TNFAIP8L3Q5GJ75 292 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 TCTE1Q5JU00 501 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 WASHC2DQ5SRD0 308 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 PRAMEF9Q5VWM5 478 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 ATG9BQ674R7 924 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 RHBDD2Q6NTF9 364 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 TLDC1Q6P9B6 456 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 ZYG11AQ6WRX3 759 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 HDXQ7Z353 690 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 VN1R4Q7Z5H5 301 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 EXOC3L1Q86VI1 746 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 CSNK1A1LQ8N752 337 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 TTC29Q8NA56 475 aaPredicted RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 Q8NA96 180 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 MFSD9Q8NBP5 474 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 TCP10LQ8TDR4 215 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 ZDHHC19Q8WVZ1 309 aaPredicted RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 RERGQ96A58 199 aaPredicted RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 NSUN5Q96P11 429 aaKnown RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 FAM111AQ96PZ2 611 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 TMEM237Q96Q45 408 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 OR2A5Q96R48 311 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 CAPS2Q9BXY5 557 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 SEMA4BQ9NPR2 832 aaPredicted RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 SLC17A7Q9P2U7 560 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 MID2Q9UJV3 735 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 PCTPQ9UKL6 214 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 RUVBL1Q9Y265 456 aaKnown RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 PLLPQ9Y342 182 aa8.67□□□□□ -1.02
SMC4-213ENST00000472282 PTRH2Q9Y3E5 179 aaKnown RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 PCDHGA9Q9Y5G4 932 aaKnown RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 UBR5O95071 2799 aaPredicted RBP8.67□□□□□ -1.02
SMC4-213ENST00000472282 CROCCQ5TZA2 2017 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 CPAMD8Q8IZJ3 1885 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 FITM1A5D6W6 292 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 C9J4A7 227 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 AGPSO00116 658 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 OR1F1O43749 312 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 TYROBPO43914 113 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ALOX12BO75342 701 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 SUPT7LO94864 414 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 SORBS2O94875 1100 aaKnown RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 SERPIND1P05546 499 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 UMODP07911 640 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 HBQ1P09105 142 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 TSPAN8P19075 237 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 AGXTP21549 392 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 CXCR2P25025 360 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ARL1P40616 181 aaPredicted RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 PIK3CGP48736 1102 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 CCNG1P51959 295 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 HERVK_113P63132 956 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 GRM7Q14831 915 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 PCLAFQ15004 111 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 RBBP5Q15291 538 aaKnown RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 PRTGQ2VWP7 1150 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 UNC50Q53HI1 259 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ZNF678Q5SXM1 525 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ADNP2Q6IQ32 1131 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 METTL2BQ6P1Q9 378 aaKnown RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 COX15Q7KZN9 410 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 PPP1R32Q7Z5V6 425 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 MRGPREQ86SM8 312 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ASPGQ86U10 573 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 MYLK4Q86YV6 388 aaPredicted RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 SLC22A9Q8IVM8 553 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP8.66□□□□□ -1.025e-13■■■■■ 348.1
SMC4-213ENST00000472282 KRT78Q8N1N4 520 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 TBC1D19Q8N5T2 526 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 METTL27Q8N6F8 245 aaPredicted RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 RBMXL3Q8N7X1 1067 aaKnown RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 ANKRD53Q8N9V6 530 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ZCCHC10Q8TBK6 192 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 RDH11Q8TC12 318 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 ZNF483Q8TF39 744 aaPredicted RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 ATP6V1E2Q96A05 226 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 MOCOSQ96EN8 888 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 WDR34Q96EX3 536 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 PTCD3Q96EY7 689 aaKnown RBP8.66□□□□□ -1.02
SMC4-213ENST00000472282 C10orf90Q96M02 699 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 UCN2Q96RP3 112 aa8.66□□□□□ -1.02
SMC4-213ENST00000472282 MACROD1Q9BQ69 325 aa8.66□□□□□ -1.02
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms