RNA–Protein interactions for RNA: ENST00000472044.1

PTCD3-209, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 293 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-209ENST00000472044 GIFP27352 417 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 GPR183P32249 361 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 HNF4AP41235 474 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 SLC1A3P43003 542 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 LUMP51884 338 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 IRX1P78414 480 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CNTN1Q12860 1018 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CEACAM7Q14002 265 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 MAPK11Q15759 364 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 LRRC37A5PQ49AS3 106 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CEP85LQ5SZL2 805 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 PRAMEF8Q5VWM4 474 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CES4AQ5XG92 561 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 ZNF613Q6PF04 617 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CD164L2Q6UWJ8 174 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 C3P1Q6ZMU1 363 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 C17orf107Q6ZR85 190 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CYP4V2Q6ZWL3 525 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 RAPH1Q70E73 1250 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 DND1Q8IYX4 353 aaKnown RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 PRSS33Q8NF86 280 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 OR10G7Q8NGN6 311 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 PSMA8Q8TAA3 256 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 GTF3AQ92664 365 aaKnown RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 GGHQ92820 318 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 SLC35C1Q96A29 364 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 RFT1Q96AA3 541 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 BPIFA2Q96DR5 249 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 MOCOSQ96EN8 888 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 C5orf30Q96GV9 206 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 LINC00479Q96M42 142 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 LRRC2Q9BYS8 371 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 TRIM7Q9C029 511 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 NAPBQ9H115 298 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 B3GAT2Q9NPZ5 323 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 COMMD8Q9NX08 183 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 CWC25Q9NXE8 425 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 NDE1Q9NXR1 346 aa3.24□□□□□ -1.89
PTCD3-209ENST00000472044 DBF4Q9UBU7 674 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 FOXA2Q9Y261 457 aaPredicted RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 TDRD15B5MCY1 1934 aaKnown RBP3.24□□□□□ -1.89
PTCD3-209ENST00000472044 TMEM129A0AVI4 362 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 GLTPD2A6NH11 291 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 TCP10L2B9ZVM9 353 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 RTCAO00442 366 aaKnown RBP3.23□□□□□ -1.89
PTCD3-209ENST00000472044 SYT7O43581 403 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 MTRF1O75570 445 aaKnown RBP3.23□□□□□ -1.89
PTCD3-209ENST00000472044 FGF19O95750 216 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 CYP3A5P20815 502 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 TMEM50BP56557 158 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 NME5P56597 212 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 HILS1P60008 231 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 GABPAQ06546 454 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 ACTN3Q08043 901 aaPredicted RBP3.23□□□□□ -1.89
PTCD3-209ENST00000472044 Q6ZVQ6 151 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 RFPL4BQ6ZWI9 263 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 TMEM126BQ8IUX1 230 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 CARNMT1Q8N4J0 409 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 SMYD1Q8NB12 490 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 SPC24Q8NBT2 197 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 OR5M9Q8NGP3 310 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 OR13C5Q8NGS8 318 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 C8orf46Q8TAG6 207 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 KRT35Q92764 455 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 ULK4Q96C45 1275 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 CFAP36Q96G28 342 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 GUCD1Q96NT3 240 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 MCRIP2Q9BUT9 160 aaKnown RBP3.23□□□□□ -1.89
PTCD3-209ENST00000472044 SPHK2Q9NRA0 654 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 UBQLN2Q9UHD9 624 aa3.23□□□□□ -1.89
PTCD3-209ENST00000472044 IGHV3-20A0A0C4DH32 117 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 ATP6AP2A0A1C7CYW4 349 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 CCDC162PA2VCL2 907 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 SRRM4A7MD48 611 aaKnown RBP3.22□□□□□ -1.89
PTCD3-209ENST00000472044 G3V2L1 256 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 CCSO14618 274 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 DCXO43602 365 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 LRCH4O75427 683 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 NXPH4O95158 308 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 DUS4LO95620 317 aaKnown RBP3.22□□□□□ -1.89
PTCD3-209ENST00000472044 ANGPTL1O95841 491 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 OLFM2O95897 454 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 ODC1P11926 461 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 ANPEPP15144 967 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 UGT1A4P22310 534 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 ACKR3P25106 362 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 OR1D2P34982 312 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 CCR4P51679 360 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 UCP2P55851 309 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 ERVK-16P61578 105 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 ARF5P84085 180 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 DHODHQ02127 395 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 MFGE8Q08431 387 aaPredicted RBP3.22□□□□□ -1.89
PTCD3-209ENST00000472044 NPRL3Q12980 569 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 CALCOCO2Q13137 446 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 RPA4Q13156 261 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 NFATC2Q13469 925 aa3.22□□□□□ -1.89
PTCD3-209ENST00000472044 LASP1Q14847 261 aaKnown RBP3.22□□□□□ -1.89
PTCD3-209ENST00000472044 FASTKD3Q14CZ7 662 aaKnown RBP3.22□□□□□ -1.89
PTCD3-209ENST00000472044 FCN2Q15485 313 aa3.22□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms