RNA–Protein interactions for RNA: ENST00000470091.1

LINC00173-201, long intergenic non-protein coding RNA 173, humanhuman

TSL 1 (best) BASIC

Gene LINC00173, Length 435 nt, Biotype lincRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00173-201ENST00000470091 CLGNO14967 610 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ZNF749O43361 778 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 CCDC22O60826 627 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ATP6AP2O75787 350 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 SERPINA6P08185 405 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 NCF2P19878 526 aaPredicted RBP12.96□□□□□ -0.33
LINC00173-201ENST00000470091 OTX2P32243 289 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 RORAP35398 523 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 IRF8Q02556 426 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 CHIT1Q13231 466 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ARHGAP19Q14CB8 494 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 GGTA1PQ4G0N0 100 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 PRR30Q53SZ7 412 aaPredicted RBP12.96□□□□□ -0.33
LINC00173-201ENST00000470091 XKR6Q5GH73 641 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 FHL5Q5TD97 284 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 C1orf189Q5VU69 101 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 PRAMEF13Q5VWM6 474 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 TMPRSS11BQ86T26 416 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ADGRF3Q8IZF5 1079 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 L3MBTL4Q8NA19 623 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 GALNT11Q8NCW6 608 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ADAMTS17Q8TE56 1095 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 LRFN5Q96NI6 719 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 HBEGFQ99075 208 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 NUDT9Q9BW91 350 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 SPRTNQ9H040 489 aaPredicted RBP12.96□□□□□ -0.33
LINC00173-201ENST00000470091 SLAMF7Q9NQ25 335 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ACTR10Q9NZ32 417 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 POLG2Q9UHN1 485 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ICKQ9UPZ9 632 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 DYRK1BQ9Y463 629 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 ZNF451Q9Y4E5 1061 aa12.96□□□□□ -0.33
LINC00173-201ENST00000470091 UNC79Q9P2D8 2635 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 ZNF839A8K0R7 811 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 C2orf74A8MZ97 194 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 CD22P20273 847 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 AGXTP21549 392 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 VARSP26640 1264 aaKnown RBP12.95□□□□□ -0.34
LINC00173-201ENST00000470091 HSD17B2P37059 387 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 ATP1A4Q13733 1029 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 INPP5JQ15735 1006 aaPredicted RBP12.95□□□□□ -0.34
LINC00173-201ENST00000470091 CPSF6Q16630 551 aaKnown RBP eCLIP12.95□□□□□ -0.34
LINC00173-201ENST00000470091 EIF2S3LQ2VIR3 472 aaKnown RBP12.95□□□□□ -0.34
LINC00173-201ENST00000470091 DEFB110Q30KQ9 67 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 GALNTL6Q49A17 601 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 SGO1Q5FBB7 561 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 XKR7Q5GH72 579 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 SPDYAQ5MJ70 313 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 THEMIS2Q5TEJ8 643 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 FAM198BQ6UWH4 519 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 GPR135Q8IZ08 494 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 RAB42Q8N4Z0 105 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 LINC01555Q8NAE3 123 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 OR2T11Q8NH01 316 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 SMPDL3AQ92484 453 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 NEIL2Q969S2 332 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 RAB11FIP5Q9BXF6 653 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 AKTIPQ9H8T0 292 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 FAM60AQ9NP50 221 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 SAR1AQ9NR31 198 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 FARSBQ9NSD9 589 aaKnown RBP12.95□□□□□ -0.34
LINC00173-201ENST00000470091 GPRC5BQ9NZH0 403 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 TRIM33Q9UPN9 1127 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 MAP4K5Q9Y4K4 846 aa12.95□□□□□ -0.34
LINC00173-201ENST00000470091 A0A1W2PPV9 198 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 C9J4A7 227 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 HCRTR1O43613 425 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 DPM1O60762 260 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 CTSBP07858 339 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 PSMB5P28074 263 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 RAB28P51157 221 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 DMTNQ08495 405 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 DOC2AQ14183 400 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 ABRAXAS2Q15018 415 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 NCF4Q15080 339 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 ZRSR2Q15696 482 aaKnown RBP12.94□□□□□ -0.34
LINC00173-201ENST00000470091 ZIC1Q15915 447 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 FAM91A1Q658Y4 838 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 JMJD6Q6NYC1 403 aaPredicted RBP12.94□□□□□ -0.34
LINC00173-201ENST00000470091 SPESP1Q6UW49 350 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 LCTLQ6UWM7 567 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 SLCO4C1Q6ZQN7 724 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 LARP4Q71RC2 724 aaKnown RBP eCLIP12.94□□□□□ -0.34
LINC00173-201ENST00000470091 TREML1Q86YW5 311 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 GBP7Q8N8V2 638 aaPredicted RBP12.94□□□□□ -0.34
LINC00173-201ENST00000470091 OR2L8Q8NGY9 312 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 CEP70Q8NHQ1 597 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 SLC5A11Q8WWX8 675 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 TUBGCP3Q96CW5 907 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 CCDC106Q9BWC9 280 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 ACAT2Q9BWD1 397 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 ZNF385DQ9H6B1 395 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 ARL8BQ9NVJ2 186 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 IRAK4Q9NWZ3 460 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 SPHK1Q9NYA1 384 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 GPR83Q9NYM4 423 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 TAC3Q9UHF0 121 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 KCNE2Q9Y6J6 123 aa12.94□□□□□ -0.34
LINC00173-201ENST00000470091 CRYBG3Q68DQ2 2970 aa12.93□□□□□ -0.34
LINC00173-201ENST00000470091 ITPR2Q14571 2701 aa12.93□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms