RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 NFKBIDQ8NI38 313 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 PSMA8Q8TAA3 256 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 C9orf43Q8TAL5 461 aaPredicted RBP13.08□□□□□ -0.32
BRCA1-209ENST00000470026 FOPNLQ96NB1 174 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 PIP5K1AQ99755 562 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 CDCA4Q9BXL8 241 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 ZBP1Q9H171 429 aa13.08□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF197O14709 1029 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 LILRB5O75023 590 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 SH3BGRLO75368 114 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 RECKO95980 971 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PTHP01270 115 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 STSP08842 583 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 C1GALT1C1LP0DN25 315 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 CCR2P41597 374 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 OR1E2P47887 323 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 VASPP50552 380 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 TBPL1P62380 186 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 CDK6Q00534 326 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF45Q02386 682 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 BCL7AQ4VC05 210 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 TRIM40Q6P9F5 258 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 UNC5DQ6UXZ4 953 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 DSG4Q86SJ6 1040 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PHF6Q8IWS0 365 aaKnown RBP eCLIP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 REM2Q8IYK8 340 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 NRSN1Q8IZ57 195 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 METTL4Q8N3J2 472 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 KBTBD8Q8NFY9 601 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 C16orf78Q8WTQ4 265 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 IRF7Q92985 503 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 MAPKAP1Q9BPZ7 522 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 GPR83Q9NYM4 423 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 FAM8A1Q9UBU6 413 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 FTSJ1Q9UET6 329 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 KCND3Q9UK17 655 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 SH2B3Q9UQQ2 575 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 HCN4Q9Y3Q4 1203 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PRAMEF33A0A0G2JMD5 474 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 SH3D21A4FU49 640 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ZAR1LA6NP61 321 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PLK4O00444 970 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PRAMEF10O60809 474 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 IFNA14P01570 189 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 C8AP07357 584 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 MMP12P39900 470 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ETV6P41212 452 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 RGS6P49758 472 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 OLR1P78380 273 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 SLBPQ14493 270 aaKnown RBP eCLIP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PRSS53Q2L4Q9 553 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF805Q5CZA5 627 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PNCKQ6P2M8 343 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 TMEM220Q6QAJ8 160 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 LIPIQ6XZB0 460 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 CCDC149Q6ZUS6 474 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF367Q7RTV3 350 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 TMCO2Q7Z6W1 182 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 SLC30A8Q8IWU4 369 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 CIDECQ96AQ7 238 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PPCDCQ96CD2 204 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 LRIG1Q96JA1 1093 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 TCF25Q9BQ70 676 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 AMBNQ9NP70 447 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 CREBZFQ9NS37 354 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 TAS2R9Q9NYW1 312 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 CNOT2Q9NZN8 540 aaKnown RBP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ENOPH1Q9UHY7 261 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ITGB1BP2Q9UKP3 347 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PCDHGA4Q9Y5G9 962 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 CFAP20Q9Y6A4 193 aaKnown RBP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 ENPP4Q9Y6X5 453 aa13.07□□□□□ -0.32
BRCA1-209ENST00000470026 MN1Q10571 1320 aaPredicted RBP13.07□□□□□ -0.32
BRCA1-209ENST00000470026 PIPSLA2A3N6 862 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ZBBXA8MT70 800 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 TLL1O43897 1013 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 TYRP14679 529 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 GSSP48637 474 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 IDH2P48735 452 aaKnown RBP13.06□□□□□ -0.32
BRCA1-209ENST00000470026 MC1RQ01726 317 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ST3GAL4Q11206 333 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 SLC5A12Q1EHB4 618 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ZNF770Q6IQ21 691 aaPredicted RBP13.06□□□□□ -0.32
BRCA1-209ENST00000470026 IKBIPQ70UQ0 350 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 OR9Q2Q8NGE9 314 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 OR52J3Q8NH60 311 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 WDR48Q8TAF3 677 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 APOBEC4Q8WW27 367 aaKnown RBP13.06□□□□□ -0.32
BRCA1-209ENST00000470026 MYLIPQ8WY64 445 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 ICKQ9UPZ9 632 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 DSPPQ9NZW4 1301 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 H3BM21 787 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 J3KTA2 159 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 PSMD11O00231 422 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 PCDH17O14917 1159 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 RHCEP18577 417 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 IRS1P35568 1242 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 PIK3CBP42338 1070 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 SLC15A1P46059 708 aa13.06□□□□□ -0.32
BRCA1-209ENST00000470026 PRIM2P49643 509 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms